RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 TBC1D5Q92609 795 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 SAAL1Q96ER3 474 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 BICD1Q96G01 975 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 TFCP2L1Q9NZI6 479 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 RTN3O95197 1032 aaPredicted RBP10.21□□□□□ -0.77
MSH5-205ENST00000395853 PEX19P40855 299 aa10.21□□□□□ -0.77
MSH5-205ENST00000395853 ZCRB1Q8TBF4 217 aaKnown RBP10.21□□□□□ -0.77
MSH5-205ENST00000395853 UBXN4Q92575 508 aa10.21□□□□□ -0.77
MSH5-205ENST00000395853 L2HGDHQ9H9P8 463 aa10.21□□□□□ -0.77
MSH5-205ENST00000395853 ZDHHC9Q9Y397 364 aa10.21□□□□□ -0.77
MSH5-205ENST00000395853 FLT4P35916 1363 aa10.21□□□□□ -0.77
MSH5-205ENST00000395853 SEC31AO94979 1220 aaKnown RBP10.21□□□□□ -0.78
MSH5-205ENST00000395853 KRT24Q2M2I5 525 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 CCDC183Q5T5S1 534 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 IP6K1Q92551 441 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.78
MSH5-205ENST00000395853 EYA1Q99502 592 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.78
MSH5-205ENST00000395853 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.78
MSH5-205ENST00000395853 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 TDRD7Q8NHU6 1098 aaKnown RBP10.2□□□□□ -0.78
MSH5-205ENST00000395853 C17orf50Q8WW18 174 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 TCP11Q8WWU5 503 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 HOMER3Q9NSC5 361 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 ZBTB40Q9NUA8 1239 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 ORC3Q9UBD5 711 aaPredicted RBP10.2□□□□□ -0.78
MSH5-205ENST00000395853 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
MSH5-205ENST00000395853 TMX3Q96JJ7 454 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 CHAMP1Q96JM3 812 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 CD2APQ9Y5K6 639 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 NEXNQ0ZGT2 675 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 LAMB3Q13751 1172 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 DBN1Q16643 649 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 MTHFSDQ2M296 383 aaKnown RBP10.2□□□□□ -0.78
MSH5-205ENST00000395853 WLSQ5T9L3 541 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 NLGN2Q8NFZ4 835 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 VPS18Q9P253 973 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 CEP126Q9P2H0 1117 aa10.2□□□□□ -0.78
MSH5-205ENST00000395853 ERC2O15083 957 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 DRC7Q8IY82 874 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 NME8Q8N427 588 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 PHC3Q8NDX5 983 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
MSH5-205ENST00000395853 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 TMEM165Q9HC07 324 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 SMAPO00193 183 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 CHL1O00533 1208 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 SKAP2O75563 359 aaPredicted RBP10.19□□□□□ -0.78
MSH5-205ENST00000395853 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.78
MSH5-205ENST00000395853 HOXC9P31274 260 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 CC2D1AQ6P1N0 951 aaPredicted RBP10.19□□□□□ -0.78
MSH5-205ENST00000395853 MRFAP1Q9Y605 127 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
MSH5-205ENST00000395853 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 ADCY9O60503 1353 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 MYL1P05976 194 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 RANBP1P43487 201 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 USP4Q13107 963 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
MSH5-205ENST00000395853 B4GALNT2Q8NHY0 566 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 SPDL1Q96EA4 605 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 LTV1Q96GA3 475 aaPredicted RBP10.18□□□□□ -0.78
MSH5-205ENST00000395853 UTP14AQ9BVJ6 771 aaKnown RBP10.18□□□□□ -0.78
MSH5-205ENST00000395853 ARFGAP3Q9NP61 516 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 MYO6Q9UM54 1294 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 H3BQF6 201 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 H7C1W4 665 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 NAA25Q14CX7 972 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 RCSD1Q6JBY9 416 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 ARL10Q8N8L6 244 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 BICD2Q8TD16 824 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
MSH5-205ENST00000395853 AGAP3Q96P47 875 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 CD248Q9HCU0 757 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
MSH5-205ENST00000395853 AKAP2Q9Y2D5 859 aa10.18□□□□□ -0.78
MSH5-205ENST00000395853 KDRP35968 1356 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 FRMD3A2A2Y4 597 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 ENO4A6NNW6 628 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
MSH5-205ENST00000395853 CAPN15O75808 1086 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 HSPA6P17066 643 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 SLC8A3P57103 927 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 TSGA10Q9BZW7 698 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
MSH5-205ENST00000395853 MX1P20591 662 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 IQCB1Q15051 598 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 CCDC93Q567U6 631 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 COL23A1Q86Y22 540 aaPredicted RBP10.17□□□□□ -0.78
MSH5-205ENST00000395853 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 RIPOR2Q9Y4F9 1068 aa10.17□□□□□ -0.78
MSH5-205ENST00000395853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.17□□□□□ -0.787e-8■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 498.9 ms