RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 RPGRQ92834 1020 aaKnown RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 ZMAT2Q96NC0 199 aaKnown RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 ZNF408Q9H9D4 720 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 SLC30A1Q9Y6M5 507 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 MYO1BO43795 1136 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 ABL1P00519 1130 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 FDX1P10109 184 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 ZNF24P17028 368 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 HTR3AP46098 478 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 CFAP58Q5T655 872 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 MZT2AQ6P582 158 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 CTR9Q6PD62 1173 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 MMS22LQ6ZRQ5 1243 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 TMC1Q8TDI8 760 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 HPS3Q969F9 1004 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC4-204ENST00000395198 TRPV5Q9NQA5 729 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 TSKSQ9UJT2 592 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 DCTN4Q9UJW0 460 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 MSL3P1P0C860 447 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 TNNT1P13805 278 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 GALNSP34059 522 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 CAP2P40123 477 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 PDE4BQ07343 736 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 ANKRD39Q53RE8 183 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 HIBCHQ6NVY1 386 aaPredicted RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 NEK10Q6ZWH5 1172 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 OTOP3Q7RTS5 596 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 DDX42Q86XP3 938 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC4-204ENST00000395198 TATDN2Q93075 761 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 SYAP1Q96A49 352 aaPredicted RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC4-204ENST00000395198 PRKRIP1Q9H875 184 aaPredicted RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 CNNM2Q9H8M5 875 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 PICK1Q9NRD5 415 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 C6orf203Q9P0P8 240 aaPredicted RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 PNMA8BQ9ULN7 279 aaPredicted RBP4.94□□□□□ -1.62
HERC4-204ENST00000395198 SQORQ9Y6N5 450 aa4.94□□□□□ -1.62
HERC4-204ENST00000395198 CCP110O43303 1012 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 KRT38O76015 456 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 ATP2B4P23634 1241 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 GTF2A2P52657 109 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 GALEQ14376 348 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 NCAPG2Q86XI2 1143 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 MNS1Q8NEH6 495 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 CLP1Q92989 425 aaKnown RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 KIFC2Q96AC6 838 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 CEP95Q96GE4 821 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 GPCPD1Q9NPB8 672 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 GIMAP2Q9UG22 337 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 TMEM98Q9Y2Y6 226 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 KINO60870 393 aaKnown RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 LAPTM5Q13571 262 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 AKNAD1Q5T1N1 836 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 EEPD1Q7L9B9 569 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 RGL4Q8IZJ4 473 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 TEX9Q8N6V9 391 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 OR8H1Q8NGG4 311 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 L3MBTL3Q96JM7 780 aaPredicted RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 WRNQ14191 1432 aaPredicted RBP eCLIP4.93□□□□□ -1.621e-6■■■■■ 58.5
HERC4-204ENST00000395198 KATNA1O75449 491 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 CTSHP09668 335 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 PARP1P09874 1014 aaKnown RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 MYBL2P10244 700 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 NOP2P46087 812 aaKnown RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 PPM1FP49593 454 aaPredicted RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 HIC1Q14526 733 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 SWSAP1Q6NVH7 229 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 CARNMT1Q8N4J0 409 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 DRAXINQ8NBI3 349 aaPredicted RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 EMID1Q96A84 441 aaPredicted RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 PDRG1Q9NUG6 133 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 CHMP5Q9NZZ3 219 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 FNIP2Q9P278 1114 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 HERC5Q9UII4 1024 aaKnown RBP4.93□□□□□ -1.62
HERC4-204ENST00000395198 LEMD3Q9Y2U8 911 aa4.93□□□□□ -1.62
HERC4-204ENST00000395198 ICMTO60725 284 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 FGFR1OPO95684 399 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 GNL2Q13823 731 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 CAPN12Q6ZSI9 719 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 ANKK1Q8NFD2 765 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 MGARPQ8TDB4 240 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 PXYLP1Q8TE99 480 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 CDK5RAP3Q96JB5 506 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 NTPCRQ9BSD7 190 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 IQCGQ9H095 443 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 ATP8A2Q9NTI2 1148 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 FAM217BQ9NTX9 383 aaPredicted RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 BLOC1S4Q9NUP1 217 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 CLIP2Q9UDT6 1046 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 TMEM94Q12767 1356 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 CPLX1O14810 134 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 ATP9BO43861 1147 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 OSBPP22059 807 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 TMC7Q7Z402 723 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 MYLK4Q86YV6 388 aaPredicted RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 IL17REQ8NFR9 667 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 ZNF594Q96JF6 807 aaPredicted RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 MOGAT1Q96PD6 335 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 NUDT12Q9BQG2 462 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms