RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 JCADQ9P266 1359 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 RNF113AO15541 343 aaKnown RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 STX17P56962 302 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-203ENST00000395060 INTS13Q9NVM9 706 aa16.47■□□□□ 0.23
CLIP2-203ENST00000395060 GRIN1Q05586 938 aa16.46■□□□□ 0.23
CLIP2-203ENST00000395060 SCARF1Q14162 830 aa16.46■□□□□ 0.23
CLIP2-203ENST00000395060 PUS7LQ9H0K6 701 aaKnown RBP16.46■□□□□ 0.23
CLIP2-203ENST00000395060 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
CLIP2-203ENST00000395060 IMMTQ16891 758 aaKnown RBP16.46■□□□□ 0.23
CLIP2-203ENST00000395060 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
CLIP2-203ENST00000395060 ARFGAP3Q9NP61 516 aa16.46■□□□□ 0.23
CLIP2-203ENST00000395060 PLEKHA4Q9H4M7 779 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 PALLDQ8WX93 1383 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 RHOXF2BP0C7M4 288 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 CASP1P29466 404 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 TTLL7Q6ZT98 887 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 RHOXF2Q9BQY4 288 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 SOWAHDA6NJG2 315 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 YEATS4O95619 227 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 CMA1P23946 247 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 ANTXR2P58335 489 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
CLIP2-203ENST00000395060 VSTM4Q8IW00 320 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 SAMSN1Q9NSI8 373 aaKnown RBP16.45■□□□□ 0.22
CLIP2-203ENST00000395060 VPS18Q9P253 973 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
CLIP2-203ENST00000395060 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 H3BQF6 201 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
CLIP2-203ENST00000395060 BMP6P22004 513 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLIP2-203ENST00000395060 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 NFE2L3Q9Y4A8 694 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 PHLPP2Q6ZVD8 1323 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 KRT40Q6A162 431 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
CLIP2-203ENST00000395060 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
CLIP2-203ENST00000395060 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 FEZ2Q9UHY8 353 aaPredicted RBP16.43■□□□□ 0.22
CLIP2-203ENST00000395060 ZNF213O14771 459 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 PHKG2P15735 406 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 ZAP70P43403 619 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 HINFPQ9BQA5 517 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 CBFA2T2O43439 604 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 KCNJ14Q9UNX9 436 aa16.43■□□□□ 0.22
CLIP2-203ENST00000395060 B4E1Z4 1266 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 CYP27B1O15528 508 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
CLIP2-203ENST00000395060 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLIP2-203ENST00000395060 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 KCNH3Q9ULD8 1083 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 POLR2DO15514 142 aaKnown RBP16.42■□□□□ 0.22
CLIP2-203ENST00000395060 PDE4CQ08493 712 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 LONRF2Q1L5Z9 754 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 CCDC158Q5M9N0 1113 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
CLIP2-203ENST00000395060 FOXP2O15409 715 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
CLIP2-203ENST00000395060 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
CLIP2-203ENST00000395060 STAMQ92783 540 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 SLC26A6Q9BXS9 759 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 ARHGAP6O43182 974 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 TEX33O43247 280 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 A1BGP04217 495 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 FOXR1Q6PIV2 292 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 BRAPQ7Z569 592 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 TMEM139Q8IV31 216 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 NCOA7Q8NI08 942 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 GDAP1L1Q96MZ0 367 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 BPIFA3Q9BQP9 254 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 CCP110O43303 1012 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 IDH1O75874 414 aaKnown RBP16.41■□□□□ 0.22
CLIP2-203ENST00000395060 AFMP43652 599 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 GPS2Q13227 327 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 TAF7LQ5H9L4 462 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 RSPH14Q9UHP6 348 aa16.41■□□□□ 0.22
CLIP2-203ENST00000395060 ABL1P00519 1130 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 CABP4P57796 275 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 TRDNQ13061 729 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 USP49Q70CQ1 688 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms