RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 UBR2Q8IWV8 1755 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 IKBKBO14920 756 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 BLOC1S2Q6QNY1 142 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 FSIP1Q8NA03 581 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
NR4A1-204ENST00000394825 PHAXQ9H814 394 aaKnown RBP18.53■□□□□ 0.56
NR4A1-204ENST00000394825 H3BQV1 296 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 CBFA2T2O43439 604 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 TUBBP07437 444 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 RPS6KB1P23443 525 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 IFFO2Q5TF58 517 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 FMR1NBQ8N0W7 255 aaPredicted RBP18.52■□□□□ 0.56
NR4A1-204ENST00000394825 CEP112Q8N8E3 955 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 CCDC102AQ96A19 550 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 PNKPQ96T60 521 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 PLEKHA4Q9H4M7 779 aa18.52■□□□□ 0.56
NR4A1-204ENST00000394825 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.55
NR4A1-204ENST00000394825 MAP4K1Q92918 833 aa18.52■□□□□ 0.55
NR4A1-204ENST00000394825 FAM212AQ96EL1 285 aa18.52■□□□□ 0.55
NR4A1-204ENST00000394825 DDX21Q9NR30 783 aaKnown RBP eCLIP18.52■□□□□ 0.55
NR4A1-204ENST00000394825 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
NR4A1-204ENST00000394825 SLC39A6Q13433 755 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 AFAP1L1Q8TED9 768 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 LIG3P49916 1009 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 CEBPZQ03701 1054 aaKnown RBP18.51■□□□□ 0.55
NR4A1-204ENST00000394825 NBPF20Q3BBV1 942 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 GRIPAP1Q4V328 841 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 LRCH2Q5VUJ6 765 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 ERCC4Q92889 916 aaPredicted RBP18.51■□□□□ 0.55
NR4A1-204ENST00000394825 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 SDF4Q9BRK5 362 aa18.51■□□□□ 0.55
NR4A1-204ENST00000394825 LRP6O75581 1613 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 SLC27A2O14975 620 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 JAK2O60674 1132 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 AARSP49588 968 aaKnown RBP eCLIP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 NLRP12P59046 1061 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 TUBB2AQ13885 445 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 VSTM4Q8IW00 320 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 TUBB2BQ9BVA1 445 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 VIPAS39Q9H9C1 493 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 GNL3LQ9NVN8 582 aaKnown RBP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 GLI3P10071 1580 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 SHOX2O60902 331 aaPredicted RBP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 DDR1Q08345 913 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 POLA2Q14181 598 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 TTLL5Q6EMB2 1281 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
NR4A1-204ENST00000394825 SUGCTQ9HAC7 445 aa18.5■□□□□ 0.55
NR4A1-204ENST00000394825 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 WDHD1O75717 1129 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 PRPF6O94906 941 aaKnown RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 COL9A3Q14050 684 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 MRPS27Q92552 414 aaKnown RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 KIF3CO14782 793 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 STX10O60499 249 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 PHACTR2O75167 634 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 DDX58O95786 925 aaKnown RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 UBASH3AP57075 661 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 GBP6Q6ZN66 633 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 TBC1D22AQ8WUA7 517 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 CCDC12Q8WUD4 166 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
NR4A1-204ENST00000394825 HSD3B7Q9H2F3 369 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 FAM169AQ9Y6X4 670 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
NR4A1-204ENST00000394825 RNF40O75150 1001 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 FBXW10Q5XX13 1052 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
NR4A1-204ENST00000394825 USP28Q96RU2 1077 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 CDC23Q9UJX2 597 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 THRAP3Q9Y2W1 955 aaKnown RBP18.48■□□□□ 0.55
NR4A1-204ENST00000394825 NEDD4P46934 1319 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 UBAP1LF5GYI3 381 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
NR4A1-204ENST00000394825 LMOD1P29536 600 aaPredicted RBP18.48■□□□□ 0.55
NR4A1-204ENST00000394825 SNRKQ9NRH2 765 aa18.48■□□□□ 0.55
NR4A1-204ENST00000394825 A0A1W2PQ27 194 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 A0A1W2PQ64 194 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 A0A1W2PQD8 194 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 EBAG9O00559 213 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 TOP1P11387 765 aaKnown RBP18.47■□□□□ 0.55
NR4A1-204ENST00000394825 STK3Q13188 491 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 WWC2Q6AWC2 1192 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 MIEF2Q96C03 454 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 CLIC6Q96NY7 704 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 BAG1Q99933 345 aaPredicted RBP18.47■□□□□ 0.55
NR4A1-204ENST00000394825 FTOQ9C0B1 505 aaKnown RBP eCLIP18.47■□□□□ 0.55
NR4A1-204ENST00000394825 RBM28Q9NW13 759 aaKnown RBP18.47■□□□□ 0.55
NR4A1-204ENST00000394825 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
NR4A1-204ENST00000394825 PI4KAP2A4QPH2 592 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms