RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MCM7P33993 719 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 GNG11P61952 73 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 TUBB4BP68371 445 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 CCDC65Q8IXS2 484 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 EIF6P56537 245 aaKnown RBP16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 HS1BP3Q53T59 392 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 GOLGA6L10A0A0M3HER8 536 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 PHACTR2O75167 634 aa16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
PPARGC1B-203ENST00000394320 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 LMBR1Q8WVP7 490 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 FAM227BQ96M60 508 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 CTNNBL1Q8WYA6 563 aaPredicted RBP16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 APBB1IPQ7Z5R6 666 aaPredicted RBP16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 COPRSQ9NQ92 184 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
PPARGC1B-203ENST00000394320 KIF4AO95239 1232 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 SKILP12757 684 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 ZAP70P43403 619 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 ANO1Q5XXA6 986 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 ACTN2P35609 894 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 CUTAO60888 179 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 MCTP2Q6DN12 878 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
PPARGC1B-203ENST00000394320 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 TAF5LO75529 589 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 RRP9O43818 475 aaKnown RBP16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 TACC1O75410 805 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 SAP30BPQ9UHR5 308 aaKnown RBP16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 PUF60Q9UHX1 559 aaKnown RBP16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 MACROD2A1Z1Q3 448 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 CIAO1O76071 339 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 PLS1Q14651 629 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 TMC4Q7Z404 712 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 ZKSCAN3Q9BRR0 538 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 AKNAD1Q5T1N1 836 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 TCHPQ9BT92 498 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
PPARGC1B-203ENST00000394320 APBA3O96018 575 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 CCDC175P0C221 793 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 MYL5Q02045 173 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 JAG2Q9Y219 1238 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 DYDC1Q8WWB3 177 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 LOC102724428A0A0B4J2F2 783 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 SEC24BO95487 1268 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 RXRAP19793 462 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 SIK1P57059 783 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 KDM6BO15054 1643 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 KRT86O43790 486 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 LETM2Q2VYF4 491 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 NEK11Q8NG66 645 aa16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 V9GY48 417 aaPredicted RBP16.29■□□□□ 0.2
PPARGC1B-203ENST00000394320 ERBB3P21860 1342 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 SHTN1A0MZ66 631 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 SEMA3EO15041 775 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 MSANTD4Q8NCY6 345 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 NONOQ15233 471 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■■■□□ 16.5
PPARGC1B-203ENST00000394320 HAUS7Q99871 368 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 KCNQ3O43525 872 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 BBXQ8WY36 941 aaPredicted RBP16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
PPARGC1B-203ENST00000394320 KIF5AQ12840 1032 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 CNGA4Q8IV77 575 aa16.27■□□□□ 0.2
PPARGC1B-203ENST00000394320 CCDC42Q96M95 316 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms