RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SMC2O95347 1197 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 NOP2P46087 812 aaKnown RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 CTSWP56202 376 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 CCAR1Q8IX12 1150 aaKnown RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 DDX19AQ9NUU7 478 aaKnown RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 UBE2Q2LH0YL09 131 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 SART3Q15020 963 aaKnown RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 RRP12Q5JTH9 1297 aaKnown RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 BICDL1Q6ZP65 573 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 TMC6Q7Z403 805 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 CARD6Q9BX69 1037 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 GPR108Q9NPR9 543 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 KDM4FA0A1W2PPD8 638 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 IQCB1Q15051 598 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 ISM2Q6H9L7 571 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 GOLPH3LQ9H4A5 285 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 ARGLU1Q9NWB6 273 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 RIPOR2Q9Y4F9 1068 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 GLI3P10071 1580 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 UBN2Q6ZU65 1347 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 FDPSP14324 419 aaKnown RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 CASQ1P31415 396 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 TEX2Q8IWB9 1127 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 ZKSCAN3Q9BRR0 538 aa11.49□□□□□ -0.57
PSEN1-204ENST00000394164 ORC3Q9UBD5 711 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 RRP15Q9Y3B9 282 aaKnown RBP11.49□□□□□ -0.57
PSEN1-204ENST00000394164 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 A0A1B0GVL5 298 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 B4E1Z4 1266 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
PSEN1-204ENST00000394164 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 GOLGA8FQ08AF8 430 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 GOLGA8DPQ0D2H9 430 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 SMC1AQ14683 1233 aaKnown RBP11.48□□□□□ -0.57
PSEN1-204ENST00000394164 PHKBQ93100 1093 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 CSF1RP07333 972 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 GPS2Q13227 327 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
PSEN1-204ENST00000394164 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 APPBP2Q92624 585 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-204ENST00000394164 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 ZSWIM4Q9H7M6 989 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 EFCC1Q9HA90 598 aa11.48□□□□□ -0.57
PSEN1-204ENST00000394164 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 ANTXR2P58335 489 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 TBC1D10CQ8IV04 446 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 SMARCC2Q8TAQ2 1214 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 CFAP45Q9UL16 551 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 BIN1O00499 593 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 PRKAB2O43741 272 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 ZRANB2O95218 330 aaKnown RBP eCLIP11.47□□□□□ -0.57
PSEN1-204ENST00000394164 NFXL1Q6ZNB6 911 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-204ENST00000394164 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
PSEN1-204ENST00000394164 FSIP1Q8NA03 581 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 C8orf76Q96K31 380 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 TEX13AQ9BXU3 409 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-204ENST00000394164 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
PSEN1-204ENST00000394164 NEMFO60524 1076 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 PDE8BO95263 885 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 CDC25BP30305 580 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 BCAMP50895 628 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 EVCP57679 992 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 E2F4Q16254 413 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 AIDAQ96BJ3 306 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.57
PSEN1-204ENST00000394164 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 KCNQ2O43526 872 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 MARCKSP29966 332 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-204ENST00000394164 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 TRDNQ13061 729 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
PSEN1-204ENST00000394164 NCOA7Q8NI08 942 aa11.46□□□□□ -0.57
PSEN1-204ENST00000394164 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
PSEN1-204ENST00000394164 ELP1O95163 1332 aa11.46□□□□□ -0.58
PSEN1-204ENST00000394164 SMIM22K7EJ46 135 aa11.46□□□□□ -0.58
PSEN1-204ENST00000394164 CCDC73Q6ZRK6 1079 aa11.46□□□□□ -0.58
PSEN1-204ENST00000394164 SRLQ86TD4 932 aa11.46□□□□□ -0.58
PSEN1-204ENST00000394164 ZSCAN16Q9H4T2 348 aaPredicted RBP11.46□□□□□ -0.58
PSEN1-204ENST00000394164 L2HGDHQ9H9P8 463 aa11.46□□□□□ -0.58
PSEN1-204ENST00000394164 ABCF2Q9UG63 623 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms