RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 KIF24Q5T7B8 1368 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 H0YCG3 227 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 NOP56O00567 594 aaKnown RBP8.09□□□□□ -1.11
DDX60-201ENST00000393743 MBD4O95243 580 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 MMRN2Q9H8L6 949 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 ZBTB24O43167 697 aaPredicted RBP8.09□□□□□ -1.11
DDX60-201ENST00000393743 RUFY3Q7L099 469 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 CROCCP2Q86T23 111 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDX60-201ENST00000393743 ELP1O95163 1332 aa8.09□□□□□ -1.11
DDX60-201ENST00000393743 LIN9Q5TKA1 542 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 TRMT1LQ7Z2T5 733 aaKnown RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 SLAIN2Q9P270 581 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 ATP6V0A2Q9Y487 856 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 A0A1W2PP64 1363 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 TNNC1P63316 161 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 DLGAP5Q15398 846 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 DHX58Q96C10 678 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 RTEL1Q9NZ71 1219 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 USP21Q9UK80 565 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 ARHGEF5Q12774 1597 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 EEF2P13639 858 aaKnown RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 DNA2P51530 1060 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 PTPDC1A2A3K4 754 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 ATP2B4P23634 1241 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 NT5C2P49902 561 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 GRM1Q13255 1194 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 OTUD7BQ6GQQ9 843 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDX60-201ENST00000393743 CSADQ9Y600 493 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 FAM169AQ9Y6X4 670 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 A0A1B0GUL7 405 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 MPNDQ8N594 471 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
DDX60-201ENST00000393743 ARPP21Q9UBL0 812 aaPredicted RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 LUC7L2Q9Y383 392 aaKnown RBP8.08□□□□□ -1.12
DDX60-201ENST00000393743 COL17A1Q9UMD9 1497 aaPredicted RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 ARHGEF35A5YM69 484 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 GNPTABQ3T906 1256 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 GSTA5Q7RTV2 222 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 MIGA1Q8NAN2 632 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 JARID2Q92833 1246 aaPredicted RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 MAK16Q9BXY0 300 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 CTAGE9A4FU28 777 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 HSPA2P54652 639 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 TRPC3Q13507 836 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 TEKT1Q969V4 418 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 BICC1Q9H694 974 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.12
DDX60-201ENST00000393743 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 YEATS2Q9ULM3 1422 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 P4HA1P13674 534 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 RAB3GAP1Q15042 981 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CEP135Q66GS9 1140 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 GPR161Q8N6U8 529 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 ANGEL1Q9UNK9 670 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 CETN3O15182 167 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 ATP5DP30049 168 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CCT6AP40227 531 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 ADCY7P51828 1080 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CALCOCO2Q13137 446 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 NONOQ15233 471 aaKnown RBP eCLIP8.07□□□□□ -1.12
DDX60-201ENST00000393743 SEL1L2Q5TEA6 688 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 PODXL2Q9NZ53 605 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CFAP74Q9C0B2 1584 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 PZPP20742 1482 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 SLC1A4P43007 532 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 PLCB3Q01970 1234 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 CWF19L2Q2TBE0 894 aaKnown RBP8.07□□□□□ -1.12
DDX60-201ENST00000393743 NECAB1Q8N987 351 aa8.07□□□□□ -1.12
DDX60-201ENST00000393743 KIAA0232Q92628 1395 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 SMC6Q96SB8 1091 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
DDX60-201ENST00000393743 TMEM2Q9UHN6 1383 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 BIRC3Q13489 604 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 SLC4A8Q2Y0W8 1093 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 CFAP58Q5T655 872 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 CCDC110Q8TBZ0 833 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 NT5C3AQ9H0P0 336 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 CHMLP26374 656 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 MCM7P33993 719 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 ZNF772Q68DY9 489 aaPredicted RBP8.06□□□□□ -1.12
DDX60-201ENST00000393743 OTUD6AQ7L8S5 288 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 MIS12Q9H081 205 aa8.06□□□□□ -1.12
DDX60-201ENST00000393743 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms