RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PRC1O43663 620 aa10.21□□□□□ -0.77
TDP1-203ENST00000393454 GTF2IP78347 998 aa10.21□□□□□ -0.77
TDP1-203ENST00000393454 GRIK5Q16478 980 aa10.21□□□□□ -0.77
TDP1-203ENST00000393454 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.77
TDP1-203ENST00000393454 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
TDP1-203ENST00000393454 DTNBO60941 627 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 LDHCP07864 332 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 APOBRQ0VD83 1088 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 PKP1Q13835 747 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 FOXD4L5Q5VV16 416 aaPredicted RBP10.21□□□□□ -0.78
TDP1-203ENST00000393454 TMED8Q6PL24 325 aaPredicted RBP10.21□□□□□ -0.78
TDP1-203ENST00000393454 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.78
TDP1-203ENST00000393454 TBC1D22AQ8WUA7 517 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 FOXD4L4Q8WXT5 416 aaPredicted RBP10.21□□□□□ -0.78
TDP1-203ENST00000393454 INCENPQ9NQS7 918 aa10.21□□□□□ -0.78
TDP1-203ENST00000393454 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.78
TDP1-203ENST00000393454 B4E1Z4 1266 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 BAG3O95817 575 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 PPARAQ07869 468 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 RRP12Q5JTH9 1297 aaKnown RBP10.2□□□□□ -0.78
TDP1-203ENST00000393454 GBP4Q96PP9 640 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 CHD4Q14839 1912 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 DUOX1Q9NRD9 1551 aa10.2□□□□□ -0.78
TDP1-203ENST00000393454 C21orf2O43822 256 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 IGSF3O75054 1194 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 POLD1P28340 1107 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 GJB2P29033 226 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 TTLL6Q8N841 843 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 DBNDD1Q9H9R9 158 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 NEDD4P46934 1319 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 FAM205AQ6ZU69 1335 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 C10orf71Q711Q0 1435 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 BAZ2AQ9UIF9 1905 aaKnown RBP10.19□□□□□ -0.78
TDP1-203ENST00000393454 MYH2Q9UKX2 1941 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 DPEP1P16444 411 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 MCM4P33991 863 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 USP5P45974 858 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 ANTXR2P58335 489 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 ST3GAL1Q11201 340 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 R3HDM1Q15032 1099 aaKnown RBP10.19□□□□□ -0.78
TDP1-203ENST00000393454 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 KRT23Q9C075 422 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 RNF41Q9H4P4 317 aaPredicted RBP10.19□□□□□ -0.78
TDP1-203ENST00000393454 CNNM2Q9H8M5 875 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
TDP1-203ENST00000393454 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
TDP1-203ENST00000393454 CYP2D7A0A087X1C5 515 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 F8W031 263 aaPredicted RBP10.18□□□□□ -0.78
TDP1-203ENST00000393454 KDM4AO75164 1064 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 CC2D2BQ6DHV5 1058 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 GIMAP6Q6P9H5 292 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 SH3RF3Q8TEJ3 882 aaPredicted RBP10.18□□□□□ -0.78
TDP1-203ENST00000393454 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
TDP1-203ENST00000393454 WDR19Q8NEZ3 1342 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 USP17L21D6R901 530 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 PFKFB2O60825 505 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 CCT2P78371 535 aaKnown RBP10.18□□□□□ -0.78
TDP1-203ENST00000393454 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 STAG1Q8WVM7 1258 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 C7orf43Q8WVR3 580 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 DCP1AQ9NPI6 582 aaPredicted RBP10.18□□□□□ -0.78
TDP1-203ENST00000393454 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 TACC3Q9Y6A5 838 aa10.18□□□□□ -0.78
TDP1-203ENST00000393454 KIAA1551Q9HCM1 1747 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 WDR33Q9C0J8 1336 aaKnown RBP10.17□□□□□ -0.78
TDP1-203ENST00000393454 KLF18A0A0U1RQI7 1052 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 BRD1O95696 1058 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 BTDP43251 543 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 SCRN1Q12765 414 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 SUPT20HQ8NEM7 779 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 ZNF274Q96GC6 653 aaPredicted RBP10.17□□□□□ -0.78
TDP1-203ENST00000393454 MTFR1LQ9H019 292 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 MCM9Q9NXL9 1143 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
TDP1-203ENST00000393454 IFIT3O14879 490 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 STX6O43752 255 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 ECE2O60344 883 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 SLC3A2P08195 630 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 SYT1P21579 422 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
TDP1-203ENST00000393454 PPP4CP60510 307 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 AOC3Q16853 763 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 SLC4A8Q2Y0W8 1093 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 TMEM67Q5HYA8 995 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 RAB11FIP4Q86YS3 637 aa10.16□□□□□ -0.78
TDP1-203ENST00000393454 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms