RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 GGA1Q9UJY5 639 aa10.26□□□□□ -0.77
CASP4-201ENST00000393150 POLR2AP24928 1970 aaKnown RBP10.25□□□□□ -0.77
CASP4-201ENST00000393150 EGFRP00533 1210 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 PTPN5P54829 565 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
CASP4-201ENST00000393150 COPS2P61201 443 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
CASP4-201ENST00000393150 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
CASP4-201ENST00000393150 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 TSPYL4Q9UJ04 414 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 NUP98P52948 1817 aa10.25□□□□□ -0.77
CASP4-201ENST00000393150 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
CASP4-201ENST00000393150 TRAK2O60296 914 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 GPR37L1O60883 481 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 UFL1O94874 794 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 FMNL1O95466 1100 aaPredicted RBP10.24□□□□□ -0.77
CASP4-201ENST00000393150 GPSM2P81274 684 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 TBC1D16Q8TBP0 767 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 TSC1Q92574 1164 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 POLLQ9UGP5 575 aa10.24□□□□□ -0.77
CASP4-201ENST00000393150 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
CASP4-201ENST00000393150 MAPK8IP3Q9UPT6 1336 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 PODNQ7Z5L7 613 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 APOBEC3FQ8IUX4 373 aaKnown RBP10.23□□□□□ -0.77
CASP4-201ENST00000393150 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
CASP4-201ENST00000393150 EPS8L1Q8TE68 723 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 GDPD2Q9HCC8 539 aa10.23□□□□□ -0.77
CASP4-201ENST00000393150 EN2P19622 333 aaPredicted RBP10.22□□□□□ -0.77
CASP4-201ENST00000393150 PRKG1Q13976 671 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 SF3B3Q15393 1217 aaKnown RBP10.22□□□□□ -0.77
CASP4-201ENST00000393150 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 MTRQ99707 1265 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 THUMPD2Q9BTF0 503 aaKnown RBP10.22□□□□□ -0.77
CASP4-201ENST00000393150 PCGF6Q9BYE7 350 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 KCNQ5Q9NR82 932 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 PTPN22Q9Y2R2 807 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 PAPPA2Q9BXP8 1791 aa10.22□□□□□ -0.77
CASP4-201ENST00000393150 MYO3BQ8WXR4 1341 aa10.21□□□□□ -0.77
CASP4-201ENST00000393150 ZBTB48P10074 688 aaPredicted RBP10.21□□□□□ -0.78
CASP4-201ENST00000393150 SP3Q02447 781 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 KIF22Q14807 665 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 CCDC152Q4G0S7 254 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 SPRYD7Q5W111 196 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 MOB2Q70IA6 237 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 DPF3Q92784 378 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 CELF1Q92879 486 aaKnown RBP10.21□□□□□ -0.78
CASP4-201ENST00000393150 ARMC5Q96C12 935 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.78
CASP4-201ENST00000393150 ANGEL1Q9UNK9 670 aaKnown RBP10.21□□□□□ -0.78
CASP4-201ENST00000393150 ASTN2O75129 1339 aaPredicted RBP10.2□□□□□ -0.78
CASP4-201ENST00000393150 UNCXA6NJT0 531 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 IRS4O14654 1257 aaPredicted RBP10.2□□□□□ -0.78
CASP4-201ENST00000393150 MYO1BO43795 1136 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 TLL1O43897 1013 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 RAD21O60216 631 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
CASP4-201ENST00000393150 SUPT20HL1Q3ZLR7 823 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 MSS51Q4VC12 460 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 PRAMEF18Q5VWM3 479 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 ZNF516Q92618 1163 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 FAM89AQ96GI7 184 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 SPSB2Q99619 263 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 BABAM1Q9NWV8 329 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 RTL9Q8NET4 1388 aa10.2□□□□□ -0.78
CASP4-201ENST00000393150 LMOD3Q0VAK6 560 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
CASP4-201ENST00000393150 ANKRD18AQ8IVF6 992 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 PLBD2Q8NHP8 589 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 HTATIP2Q9BUP3 242 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 NR2E3Q9Y5X4 410 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 CEP290O15078 2479 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 XDHP47989 1333 aa10.19□□□□□ -0.78
CASP4-201ENST00000393150 TRIOBPQ9H2D6 2365 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 COL3A1P02461 1466 aaPredicted RBP10.18□□□□□ -0.78
CASP4-201ENST00000393150 H0YGN5 161 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 JUNDP17535 347 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 IREB2P48200 963 aaKnown RBP10.18□□□□□ -0.78
CASP4-201ENST00000393150 IRF5Q13568 498 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 NBPF9Q3BBW0 867 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 CD99L2Q8TCZ2 262 aa10.18□□□□□ -0.78
CASP4-201ENST00000393150 LAMB4A4D0S4 1761 aa10.17□□□□□ -0.78
CASP4-201ENST00000393150 WNT10BO00744 389 aa10.17□□□□□ -0.78
CASP4-201ENST00000393150 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
CASP4-201ENST00000393150 NR6A1Q15406 480 aa10.17□□□□□ -0.78
CASP4-201ENST00000393150 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
CASP4-201ENST00000393150 CDC5LQ99459 802 aaKnown RBP10.17□□□□□ -0.78
CASP4-201ENST00000393150 ZFYVE28Q9HCC9 887 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms