RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
CALD1-203ENST00000393118 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
CALD1-203ENST00000393118 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 ELP1O95163 1332 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
CALD1-203ENST00000393118 NOM1Q5C9Z4 860 aaKnown RBP12.11□□□□□ -0.47
CALD1-203ENST00000393118 ESR2Q92731 530 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 TSPYL1Q9H0U9 437 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 INCENPQ9NQS7 918 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 CWC15Q9P013 229 aaKnown RBP12.11□□□□□ -0.47
CALD1-203ENST00000393118 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 ZNF202O95125 648 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
CALD1-203ENST00000393118 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 OGFRQ9NZT2 677 aa12.11□□□□□ -0.47
CALD1-203ENST00000393118 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
CALD1-203ENST00000393118 AFMP43652 599 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
CALD1-203ENST00000393118 FBXO18Q8NFZ0 1043 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 PIH1D3Q9NQM4 214 aaKnown RBP12.1□□□□□ -0.47
CALD1-203ENST00000393118 GYG1P46976 350 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 ATP2B2Q01814 1243 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 CBFA2T2O43439 604 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 NDUFA8P51970 172 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 NLRP5P59047 1200 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
CALD1-203ENST00000393118 UBASH3AP57075 661 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
CALD1-203ENST00000393118 ATL3Q6DD88 541 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 ARGLU1Q9NWB6 273 aaPredicted RBP12.09□□□□□ -0.47
CALD1-203ENST00000393118 PRKAB2O43741 272 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 C11orf57Q6ZUT1 292 aaPredicted RBP12.09□□□□□ -0.47
CALD1-203ENST00000393118 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
CALD1-203ENST00000393118 NLRP3Q96P20 1036 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 SETDB2Q96T68 719 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
CALD1-203ENST00000393118 ADD2P35612 726 aa12.08□□□□□ -0.47
CALD1-203ENST00000393118 TXLNAP40222 546 aa12.08□□□□□ -0.47
CALD1-203ENST00000393118 DACH1Q9UI36 760 aa12.08□□□□□ -0.47
CALD1-203ENST00000393118 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
CALD1-203ENST00000393118 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 ADALQ6DHV7 355 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 C10orf67Q8IYJ2 551 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 KIF18AQ8NI77 898 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
CALD1-203ENST00000393118 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 CLIC6Q96NY7 704 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 RCOR1Q9UKL0 485 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 SIK1P57059 783 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 GSDMDP57764 484 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 DHX8Q14562 1220 aaKnown RBP12.08□□□□□ -0.48
CALD1-203ENST00000393118 AKNAD1Q5T1N1 836 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
CALD1-203ENST00000393118 DHX58Q96C10 678 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 FEZ1Q99689 392 aa12.08□□□□□ -0.48
CALD1-203ENST00000393118 PPFIBP1Q86W92 1011 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 PFKFB1P16118 471 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 GNAT2P19087 354 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 PARP10Q53GL7 1025 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 APOA5Q6Q788 366 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 NEMFO60524 1076 aa12.07□□□□□ -0.48
CALD1-203ENST00000393118 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 STX17P56962 302 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 CHRNDQ07001 517 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 CRNKL1Q9BZJ0 848 aaKnown RBP12.06□□□□□ -0.48
CALD1-203ENST00000393118 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
CALD1-203ENST00000393118 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms