RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCN3B-202ENST00000392770 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
SCN3B-202ENST00000392770 MED14O60244 1454 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
SCN3B-202ENST00000392770 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 BCAMP50895 628 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 CETN1Q12798 172 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 CDC37L1Q7L3B6 337 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 ELP1O95163 1332 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 ME3Q16798 604 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 ZBTB1Q9Y2K1 713 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 DESP17661 470 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 GYG1P46976 350 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 KRT79Q5XKE5 535 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 CIAO1O76071 339 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 DNA2P51530 1060 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 CHRNDQ07001 517 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 USPL1Q5W0Q7 1092 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 PDCL2Q8N4E4 241 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 PLIN2Q99541 437 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
SCN3B-202ENST00000392770 MMRN2Q9H8L6 949 aa18.86■□□□□ 0.61
SCN3B-202ENST00000392770 JAK2O60674 1132 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 PPARAQ07869 468 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 ANO1Q5XXA6 986 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 KIDINS220Q9ULH0 1771 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 VWA3AA6NCI4 1184 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 PSMA7O14818 248 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 CCDC186Q7Z3E2 898 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 TGFBRAP1Q8WUH2 860 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 PHKBQ93100 1093 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
SCN3B-202ENST00000392770 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
SCN3B-202ENST00000392770 PIK3AP1Q6ZUJ8 805 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 ADORA1P30542 326 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 CEP135Q66GS9 1140 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 GOLGA6L9A6NEM1 432 aa18.84■□□□□ 0.61
SCN3B-202ENST00000392770 TRIM21P19474 475 aaKnown RBP18.84■□□□□ 0.61
SCN3B-202ENST00000392770 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
SCN3B-202ENST00000392770 BICD1Q96G01 975 aa18.83■□□□□ 0.61
SCN3B-202ENST00000392770 LETM2Q2VYF4 491 aa18.83■□□□□ 0.61
SCN3B-202ENST00000392770 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.61
SCN3B-202ENST00000392770 ALS2CR12Q96Q35 445 aa18.83■□□□□ 0.61
SCN3B-202ENST00000392770 LEKR1Q6ZMV7 388 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.6
SCN3B-202ENST00000392770 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 DBNLQ9UJU6 430 aaKnown RBP18.83■□□□□ 0.6
SCN3B-202ENST00000392770 PTPRMP28827 1452 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 HSPD1P10809 573 aaKnown RBP18.83■□□□□ 0.6
SCN3B-202ENST00000392770 PLS1Q14651 629 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 CWC15Q9P013 229 aaKnown RBP18.83■□□□□ 0.6
SCN3B-202ENST00000392770 ALDH1B1P30837 517 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 SPAG1Q07617 926 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 AKNAD1Q5T1N1 836 aa18.83■□□□□ 0.6
SCN3B-202ENST00000392770 USP8P40818 1118 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 LSG1Q9H089 658 aaKnown RBP18.82■□□□□ 0.6
SCN3B-202ENST00000392770 TMCO3Q6UWJ1 677 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 SIRT2Q8IXJ6 389 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 GTF3C6Q969F1 213 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 CCDC102AQ96A19 550 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 OSBPL3Q9H4L5 887 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 SKILP12757 684 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 STX17P56962 302 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 AXIN2Q9Y2T1 843 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 PDE6AP16499 860 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 FAM47AQ5JRC9 791 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
SCN3B-202ENST00000392770 MSL1Q68DK7 614 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 IFNL3Q8IZI9 196 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 PIGBQ92521 554 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 DLC1Q96QB1 1528 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 DIS3L2Q8IYB7 885 aaKnown RBP18.81■□□□□ 0.6
SCN3B-202ENST00000392770 IQUBQ8NA54 791 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
SCN3B-202ENST00000392770 GADD45BO75293 160 aaPredicted RBP18.81■□□□□ 0.6
SCN3B-202ENST00000392770 LEO1Q8WVC0 666 aaPredicted RBP18.81■□□□□ 0.6
SCN3B-202ENST00000392770 ADCY9O60503 1353 aa18.81■□□□□ 0.6
SCN3B-202ENST00000392770 GBP3Q9H0R5 595 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 GPR108Q9NPR9 543 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 ARHGEF40Q8TER5 1519 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 PDE6BP35913 854 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 CCNT1O60563 726 aaKnown RBP18.8■□□□□ 0.6
SCN3B-202ENST00000392770 KRT40Q6A162 431 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 NAP1L4Q99733 375 aaKnown RBP18.8■□□□□ 0.6
SCN3B-202ENST00000392770 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 PDE8BO95263 885 aa18.8■□□□□ 0.6
SCN3B-202ENST00000392770 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms