RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
PTPN11-202ENST00000392597 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
PTPN11-202ENST00000392597 RAI14Q9P0K7 980 aa23.57■■□□□ 1.36
PTPN11-202ENST00000392597 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
PTPN11-202ENST00000392597 KLF18A0A0U1RQI7 1052 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 IGSF3O75054 1194 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 RESTQ13127 1097 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 LRSAM1Q6UWE0 723 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 FERMT3Q86UX7 667 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 SLC16A10Q8TF71 515 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 SCAND2PQ9GZW5 306 aaPredicted RBP23.56■■□□□ 1.36
PTPN11-202ENST00000392597 NCOA5Q9HCD5 579 aaKnown RBP23.56■■□□□ 1.36
PTPN11-202ENST00000392597 GPHNQ9NQX3 736 aaPredicted RBP23.56■■□□□ 1.36
PTPN11-202ENST00000392597 GOLGA8BA8MQT2 603 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 PRR5LQ6MZQ0 368 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 HPS5Q9UPZ3 1129 aa23.56■■□□□ 1.36
PTPN11-202ENST00000392597 IRS2Q9Y4H2 1338 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 SH2B2O14492 632 aaPredicted RBP23.55■■□□□ 1.36
PTPN11-202ENST00000392597 TDO2P48775 406 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 AKNAD1Q5T1N1 836 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 NLGN1Q8N2Q7 840 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 KRT23Q9C075 422 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 LEMD3Q9Y2U8 911 aa23.55■■□□□ 1.36
PTPN11-202ENST00000392597 MAGEB6P1A0A0J9YX57 407 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 CRY2Q49AN0 593 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 CYB5R4Q7L1T6 521 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 RGS22Q8NE09 1264 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 STAG1Q8WVM7 1258 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 PDGFDQ9GZP0 370 aaPredicted RBP23.54■■□□□ 1.36
PTPN11-202ENST00000392597 NEDD4P46934 1319 aa23.54■■□□□ 1.36
PTPN11-202ENST00000392597 PRKAB2O43741 272 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 MTA3Q9BTC8 594 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 PANK2Q9BZ23 570 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 MAST2Q6P0Q8 1798 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 B4E1Z4 1266 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 KLRK1P26718 216 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 ST5P78524 1137 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 MIGA1Q8NAN2 632 aa23.53■■□□□ 1.36
PTPN11-202ENST00000392597 RIOK1Q9BRS2 568 aaKnown RBP23.53■■□□□ 1.36
PTPN11-202ENST00000392597 SYCE3A1L190 88 aa23.52■■□□□ 1.36
PTPN11-202ENST00000392597 LETM1O95202 739 aaPredicted RBP23.52■■□□□ 1.36
PTPN11-202ENST00000392597 CCDC183Q5T5S1 534 aa23.52■■□□□ 1.36
PTPN11-202ENST00000392597 MFSD6Q6ZSS7 791 aa23.52■■□□□ 1.36
PTPN11-202ENST00000392597 SGMS1Q86VZ5 419 aa23.52■■□□□ 1.36
PTPN11-202ENST00000392597 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
PTPN11-202ENST00000392597 LIFRP42702 1097 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 IGDCC4Q8TDY8 1250 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 ANAPC4Q9UJX5 808 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 XDHP47989 1333 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 SERPINB2P05120 415 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 GIMAP6Q6P9H5 292 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 C15orf52Q6ZUT6 534 aaKnown RBP23.51■■□□□ 1.35
PTPN11-202ENST00000392597 TTC6Q86TZ1 520 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 RPGRQ92834 1020 aaKnown RBP23.51■■□□□ 1.35
PTPN11-202ENST00000392597 MYH15Q9Y2K3 1946 aa23.51■■□□□ 1.35
PTPN11-202ENST00000392597 FDPSP14324 419 aaKnown RBP23.5■■□□□ 1.35
PTPN11-202ENST00000392597 CTDSPL2Q05D32 466 aa23.5■■□□□ 1.35
PTPN11-202ENST00000392597 ATL3Q6DD88 541 aa23.5■■□□□ 1.35
PTPN11-202ENST00000392597 NSUN4Q96CB9 384 aaKnown RBP23.5■■□□□ 1.35
PTPN11-202ENST00000392597 BRIP1Q9BX63 1249 aa23.5■■□□□ 1.35
PTPN11-202ENST00000392597 CCDC88AQ3V6T2 1871 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
PTPN11-202ENST00000392597 CPLX1O14810 134 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 NASPP49321 788 aaPredicted RBP23.49■■□□□ 1.35
PTPN11-202ENST00000392597 APOA5Q6Q788 366 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 LY9Q9HBG7 655 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 CFAP45Q9UL16 551 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 FAM173BQ6P4H8 233 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 ZNF384Q8TF68 577 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 SPATA32Q96LK8 384 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 KIAA1551Q9HCM1 1747 aa23.49■■□□□ 1.35
PTPN11-202ENST00000392597 CDKL5O76039 1030 aa23.48■■□□□ 1.35
PTPN11-202ENST00000392597 PPARAQ07869 468 aa23.48■■□□□ 1.35
PTPN11-202ENST00000392597 TMEM67Q5HYA8 995 aa23.48■■□□□ 1.35
PTPN11-202ENST00000392597 SPTY2D1Q68D10 685 aaPredicted RBP23.48■■□□□ 1.35
PTPN11-202ENST00000392597 LEO1Q8WVC0 666 aaPredicted RBP23.48■■□□□ 1.35
PTPN11-202ENST00000392597 ZSWIM5Q9P217 1185 aa23.48■■□□□ 1.35
PTPN11-202ENST00000392597 KDM4AO75164 1064 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 MECOMQ03112 1051 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 SART3Q15020 963 aaKnown RBP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 NKX2-3Q8TAU0 364 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 RBM17Q96I25 401 aaKnown RBP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 MTFR1LQ9H019 292 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 NID2Q14112 1375 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 PCP11498 1178 aaKnown RBP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 METAP2P50579 478 aaKnown RBP eCLIP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 MSL1Q68DK7 614 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 CPLX2Q6PUV4 134 aaKnown RBP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 ORC3Q9UBD5 711 aaPredicted RBP23.47■■□□□ 1.35
PTPN11-202ENST00000392597 TACC3Q9Y6A5 838 aa23.47■■□□□ 1.35
PTPN11-202ENST00000392597 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
PTPN11-202ENST00000392597 TXNRD3Q86VQ6 643 aa23.46■■□□□ 1.35
PTPN11-202ENST00000392597 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.35
PTPN11-202ENST00000392597 POLRMTO00411 1230 aaKnown RBP23.45■■□□□ 1.35
PTPN11-202ENST00000392597 IFIT3O14879 490 aaKnown RBP23.45■■□□□ 1.35
PTPN11-202ENST00000392597 ZBTB43O43298 467 aa23.45■■□□□ 1.35
PTPN11-202ENST00000392597 TMTC2Q8N394 836 aa23.45■■□□□ 1.35
PTPN11-202ENST00000392597 WDR66Q8TBY9 1149 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms