RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
CCDC57-203ENST00000392343 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 IRX2Q9BZI1 471 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-203ENST00000392343 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 A1BGP04217 495 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 BMP6P22004 513 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 KRT40Q6A162 431 aa16.1■□□□□ 0.17
CCDC57-203ENST00000392343 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-203ENST00000392343 CYP27B1O15528 508 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 OLFM4Q6UX06 510 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
CCDC57-203ENST00000392343 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 APPP05067 770 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CASQ1P31415 396 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 SIPA1L3O60292 1781 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-203ENST00000392343 OVOS2A0A0G2JMS6 1433 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
CCDC57-203ENST00000392343 KCNJ6P48051 423 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CABP4P57796 275 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
CCDC57-203ENST00000392343 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
CCDC57-203ENST00000392343 RGPD5Q99666 1765 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 GRIN1Q05586 938 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 CCDC158Q5M9N0 1113 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 CYB5R4Q7L1T6 521 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 KRT28Q7Z3Y7 464 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 SMARCE1Q969G3 411 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 BAG1Q99933 345 aaPredicted RBP16.08■□□□□ 0.16
CCDC57-203ENST00000392343 EFCAB8A8MWE9 144 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 GPAA1O43292 621 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 TBC1D8O95759 1140 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 ATP2B1P20020 1258 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
CCDC57-203ENST00000392343 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC57-203ENST00000392343 MTF1Q14872 753 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
CCDC57-203ENST00000392343 CCP110O43303 1012 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 CAPN2P17655 700 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 PTPAQ15257 358 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 A0A0U1RQJ8 604 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 ZSCAN12O43309 604 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
CCDC57-203ENST00000392343 B4E1Z4 1266 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 PPP2R3AQ06190 1150 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 FMR1Q06787 632 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC57-203ENST00000392343 CCDC102BQ68D86 513 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
CCDC57-203ENST00000392343 DHX58Q96C10 678 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 PARD6BQ9BYG5 372 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 NBPF3Q9H094 633 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CCDC57-203ENST00000392343 NWD2Q9ULI1 1742 aa16.06■□□□□ 0.16
CCDC57-203ENST00000392343 ARHGAP6O43182 974 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 TRDNQ13061 729 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
CCDC57-203ENST00000392343 NFXL1Q6ZNB6 911 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 MAP3K14Q99558 947 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 GPR108Q9NPR9 543 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
CCDC57-203ENST00000392343 TUBB4AP04350 444 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 RESP18Q5W5W9 173 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
CCDC57-203ENST00000392343 TC2NQ8N9U0 490 aa16.05■□□□□ 0.16
CCDC57-203ENST00000392343 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
CCDC57-203ENST00000392343 MAP3K9P80192 1104 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
CCDC57-203ENST00000392343 APPBP2Q92624 585 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
CCDC57-203ENST00000392343 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
CCDC57-203ENST00000392343 ANGEL1Q9UNK9 670 aaKnown RBP16.04■□□□□ 0.16
CCDC57-203ENST00000392343 MEGF6O75095 1541 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 JMYQ8N9B5 988 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
CCDC57-203ENST00000392343 SLC26A6Q9BXS9 759 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms