RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 AP4E1Q9UPM8 1137 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 RPLP1P05386 114 aaKnown RBP3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 FAM87AP0C7U9 286 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 EDN3P14138 238 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 AOC3Q16853 763 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 ZSWIM9Q86XI8 627 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 ZSCAN18Q8TBC5 510 aaPredicted RBP3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 FAM53CQ9NYF3 392 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 PPP1R9AQ9ULJ8 1098 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 PLAGL2Q9UPG8 496 aa3.81□□□□□ -1.8
RNU6-239P-201ENST00000390990 AOC2O75106 756 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 TNFRSF21O75509 655 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 KRT1P04264 644 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 CYP11A1P05108 521 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 PCDH1Q08174 1060 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 ELOAQ14241 798 aaKnown RBP3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 KCNMB1Q16558 191 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 FYB2Q5VWT5 728 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 SLC23A3Q6PIS1 610 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 TRIM56Q9BRZ2 755 aaKnown RBP3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 SLAIN2Q9P270 581 aa3.8□□□□□ -1.8
RNU6-239P-201ENST00000390990 EIF4EBP3O60516 100 aaPredicted RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 PHACTR2O75167 634 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 LEFTY1O75610 366 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 C1QTNF9P0C862 333 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 MZF1P28698 734 aaPredicted RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 OXCT1P55809 520 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 IFI16Q16666 785 aaKnown RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 SPRED3Q2MJR0 410 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 PRR23BQ6ZRT6 265 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 SYDE1Q6ZW31 735 aaPredicted RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 ANKLE2Q86XL3 938 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 HRASLS5Q96KN8 279 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 WDR18Q9BV38 432 aa3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 CLEC4MQ9H2X3 399 aaPredicted RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 FOXD3Q9UJU5 478 aaPredicted RBP3.79□□□□□ -1.8
RNU6-239P-201ENST00000390990 A0A096LPE4 126 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 A0A1W2PPZ6 126 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 PCSK2P16519 638 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 GRIA4P48058 902 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 NOM1Q5C9Z4 860 aaKnown RBP3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 TMEM164Q5U3C3 297 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 ANGEL2Q5VTE6 544 aaKnown RBP3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 TTC16Q8NEE8 873 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 PPP1R16BQ96T49 567 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 RAPGEFL1Q9UHV5 662 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 CTNND2Q9UQB3 1225 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 JAG2Q9Y219 1238 aa3.78□□□□□ -1.8
RNU6-239P-201ENST00000390990 TMEM265A0A087WTH1 108 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 TMPRSS2O15393 492 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 POLR3DP05423 398 aaPredicted RBP3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 CEACAM5P06731 702 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 EIF1AXP47813 144 aaKnown RBP3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 HP1BP3Q5SSJ5 553 aaPredicted RBP3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 AMIGO3Q86WK7 504 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 CCNJLQ8IV13 435 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 WDR89Q96FK6 387 aaPredicted RBP3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 CORO1BQ9BR76 489 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 MKNK2Q9HBH9 465 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 POLIQ9UNA4 740 aa3.77□□□□□ -1.81
RNU6-239P-201ENST00000390990 INHBBP09529 407 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 SRPK2P78362 688 aaKnown RBP3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 PDE3AQ14432 1141 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 SNX29Q8TEQ0 813 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 CLP1Q92989 425 aaKnown RBP3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 C20orf173Q96LM9 149 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 TCF12Q99081 682 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 DUSP23Q9BVJ7 150 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 TNKS2Q9H2K2 1166 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZFYVE1Q9HBF4 777 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 AMOTL2Q9Y2J4 779 aa3.76□□□□□ -1.81
RNU6-239P-201ENST00000390990 SYNGAP1Q96PV0 1343 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 A0A1W2PP55 124 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 NPIPB6E9PJ23 425 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 B3GALT4O96024 378 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 GLI1P08151 1106 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 LIG1P18858 919 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 ITIH2P19823 946 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 MPSTP25325 297 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 CTSWP56202 376 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZP2Q05996 745 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 ARHGAP27Q6ZUM4 889 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 SMYD4Q8IYR2 804 aaPredicted RBP3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 HELQQ8TDG4 1101 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 HEXIM2Q96MH2 286 aaKnown RBP3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 FANCD2OSQ96PS1 177 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 KCNK12Q9HB15 430 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZFYVE28Q9HCC9 887 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 DISC1Q9NRI5 854 aa3.75□□□□□ -1.81
RNU6-239P-201ENST00000390990 NFIBO00712 420 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 AFMP43652 599 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 IKZF1Q13422 519 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 MPZL3Q6UWV2 235 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 FAM214BQ7L5A3 538 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 CCDC86Q9H6F5 360 aaKnown RBP3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 LIN7BQ9HAP6 207 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 PIDD1Q9HB75 910 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 ZNF777Q9ULD5 760 aaPredicted RBP3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 SNX11Q9Y5W9 270 aa3.74□□□□□ -1.81
RNU6-239P-201ENST00000390990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms