RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 CNTNAP3Q9BZ76 1288 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 EPN3Q9H201 632 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 CRISPLD1Q9H336 500 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF576Q9H609 170 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 ZFAND3Q9H8U3 227 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 BRD7Q9NPI1 651 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 TMEM39AQ9NV64 488 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 TLR7Q9NYK1 1049 aaKnown RBP2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 MAPRE3Q9UPY8 281 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 KCNH4Q9UQ05 1017 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 PCDHB5Q9Y5E4 795 aa2.21□□□□□ -2.06
TRAJ39-201ENST00000390498 DNAJC25-GNG10A0A024R161 153 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 B2RBV5 119 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PLD2O14939 933 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PDE8AO60658 829 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RGS20O76081 388 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RASGRP1O95267 797 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 MAP3K6O95382 1288 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 KRT18P05783 430 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 MYL1P05976 194 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RARAP10276 462 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 TIMP2P16035 220 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 BMP6P22004 513 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 GUCY2CP25092 1073 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 TARSP26639 723 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RPL6Q02878 288 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PLAURQ03405 335 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 FAAP100Q0VG06 881 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 VPS72Q15906 364 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 C21orf62-AS1Q17RA5 79 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 SPRED3Q2MJR0 410 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 LONRF3Q496Y0 759 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 C4orf46Q504U0 113 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 FNDC3BQ53EP0 1204 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 INTS3Q68E01 1043 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 MRM1Q6IN84 353 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 KANK3Q6NY19 840 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 LLGL2Q6P1M3 1020 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 LYSMD3Q7Z3D4 306 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 APBB1IPQ7Z5R6 666 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RNF180Q86T96 592 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RAVER1Q8IY67 606 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 CEP120Q8N960 986 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 ZSCAN1Q8NBB4 408 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 ATL2Q8NHH9 583 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 SNIP1Q8TAD8 396 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 NXPE3Q969Y0 559 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 KIF2CQ99661 725 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 RUSC1Q9BVN2 902 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 EMILIN2Q9BXX0 1053 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM126AQ9BYI3 521 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 GSX2Q9BZM3 304 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 ZCCHC2Q9C0B9 1178 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 ZNF700Q9H0M5 742 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PHAXQ9H814 394 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 POLMQ9NP87 494 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 TIMMDC1Q9NPL8 285 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 INTS7Q9NVH2 962 aaKnown RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 BSDC1Q9NW68 430 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 BCCIPQ9P287 314 aaKnown RBP eCLIP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 GPN3Q9UHW5 284 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PCDHB14Q9Y5E9 798 aa2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.2□□□□□ -2.06
TRAJ39-201ENST00000390498 PRR36Q9H6K5 1346 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 E2F8A0AVK6 867 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 GSG1L2A8MUP6 293 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 UPK3BL1B0FP48 263 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 UPK3BL2E5RIL1 263 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 NFKBIEO00221 500 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 AGRPO00253 132 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 PDE2AO00408 941 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 IRS4O14654 1257 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ADCY3O60266 1144 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 UPP2O95045 317 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 B3GALT4O96024 378 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM157BP0CG42 384 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 ARNTP27540 789 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 SLC19A1P41440 591 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 CTSOP43234 321 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 GUCY2FP51841 1108 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 NEK2P51955 445 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 MCL1Q07820 350 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 LAMC2Q13753 1193 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 SAFB2Q14151 953 aaKnown RBP eCLIP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 MLECQ14165 292 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 FAM50AQ14320 339 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 LBRQ14739 615 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 HSP90AB4PQ58FF6 505 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 EFHC2Q5JST6 749 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 COL13A1Q5TAT6 717 aaPredicted RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 RASIP1Q5U651 963 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 FIGNL1Q6PIW4 674 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 VHLLQ6RSH7 139 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 RUFY4Q6ZNE9 571 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 DDX46Q7L014 1031 aaKnown RBP2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 PRICKLE2Q7Z3G6 844 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 KRT25Q7Z3Z0 450 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 NECAB2Q7Z6G3 386 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 CHPFQ8IZ52 775 aa2.19□□□□□ -2.06
TRAJ39-201ENST00000390498 AHI1Q8N157 1196 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 389 ms