RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 LMOD1P29536 600 aaPredicted RBP14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 KRT2P35908 639 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 ZNF830Q96NB3 372 aaPredicted RBP14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 GREM2Q9H772 168 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 ATP7BP35670 1465 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 H0YHG0 523 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 IFI16Q16666 785 aaKnown RBP14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 DHX58Q96C10 678 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.75□□□□□ -0.052e-6■□□□□ 10.4
PTPRN2-203ENST00000389418 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 N4BP3O15049 544 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 KBTBD3Q8NAB2 608 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 SRP68Q9UHB9 627 aaKnown RBP14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 SNX14Q9Y5W7 946 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 ERBB3P21860 1342 aa14.75□□□□□ -0.05
PTPRN2-203ENST00000389418 GBP2P32456 591 aaPredicted RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 CMTR1Q8N1G2 835 aaKnown RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 SEC31BQ9NQW1 1179 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 SLC27A2O14975 620 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 EAPPQ56P03 285 aaPredicted RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 MFSD14BQ5SR56 506 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 LLPHQ9BRT6 129 aaKnown RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 HOMER2Q9NSB8 354 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 SNAP23O00161 211 aa14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 NAA15Q9BXJ9 866 aaKnown RBP14.74□□□□□ -0.05
PTPRN2-203ENST00000389418 ALDH1B1P30837 517 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 CASQ1P31415 396 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 STX17P56962 302 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 GPR162Q16538 588 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 SDR42E1Q8WUS8 393 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 PHKBQ93100 1093 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 KIF1BO60333 1816 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 FAM193AP78312 1265 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 TRMT2AQ8IZ69 625 aaKnown RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 ZBTB9Q96C00 473 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 TRPC5Q9UL62 973 aaPredicted RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 PARP1P09874 1014 aaKnown RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 EZRP15311 586 aaKnown RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 PPP1R2P41236 205 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 CCDC186Q7Z3E2 898 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 CRACR2AQ9BSW2 395 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 PUF60Q9UHX1 559 aaKnown RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 KRT13P13646 458 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
PTPRN2-203ENST00000389418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.73□□□□□ -0.051e-9■■□□□ 12.7
PTPRN2-203ENST00000389418 UBASH3AP57075 661 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 RRAGBQ5VZM2 374 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 PI16Q6UXB8 463 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 SPATA5Q8NB90 893 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 BICD1Q96G01 975 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 KDM5CP41229 1560 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 CTSWP56202 376 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 TYRO3Q06418 890 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 TCHPQ9BT92 498 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 TAOK3Q9H2K8 898 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 TTF2Q9UNY4 1162 aaKnown RBP14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 GINS2Q9Y248 185 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 V9GY48 417 aaPredicted RBP14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 ERCC3P19447 782 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 LETM2Q2VYF4 491 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 LUZP1Q86V48 1076 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 AOPEPQ8N6M6 819 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 ZNF526Q8TF50 670 aaPredicted RBP14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
PTPRN2-203ENST00000389418 GOLGA6L7A0A1B0GV03 622 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 RILPL1Q5EBL4 403 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 TMCO3Q6UWJ1 677 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 CARD10Q9BWT7 1032 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 UNC13BO14795 1591 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 ANKRD62A6NC57 917 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 SEPT12Q8IYM1 358 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 PIGBQ92521 554 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 LRRIQ1Q96JM4 1722 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 IBTKQ9P2D0 1353 aaPredicted RBP14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 GSPT1P15170 499 aaKnown RBP14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 ADORA1P30542 326 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 ZNF174Q15697 407 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 IQUBQ8NA54 791 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 TBC1D5Q92609 795 aa14.71□□□□□ -0.05
PTPRN2-203ENST00000389418 ZNF521Q96K83 1311 aa14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 CCDC102AQ96A19 550 aa14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 FERMT2Q96AC1 680 aa14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 GPR101Q96P66 508 aaPredicted RBP14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 SPAG5Q96R06 1193 aa14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 TTC12Q9H892 705 aaPredicted RBP14.71□□□□□ -0.06
PTPRN2-203ENST00000389418 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
PTPRN2-203ENST00000389418 CHMP2AO43633 222 aa14.7□□□□□ -0.06
PTPRN2-203ENST00000389418 TUBB4AP04350 444 aa14.7□□□□□ -0.06
PTPRN2-203ENST00000389418 ASIC1P78348 528 aa14.7□□□□□ -0.06
PTPRN2-203ENST00000389418 DTHD1Q6ZMT9 781 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms