RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 SYNRGQ9UMZ2 1314 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 CDCA7Q9BWT1 371 aaPredicted RBP13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 GLT8D2Q9H1C3 349 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 IBTKQ9P2D0 1353 aaPredicted RBP13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 LUC7L2Q9Y383 392 aaKnown RBP13.84□□□□□ -0.19
KCNQ3-201ENST00000388996 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
KCNQ3-201ENST00000388996 CCDC117Q8IWD4 279 aaPredicted RBP13.83□□□□□ -0.19
KCNQ3-201ENST00000388996 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.19
KCNQ3-201ENST00000388996 ZFYVE16Q7Z3T8 1539 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 PPP1R7Q15435 360 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 WDR44Q5JSH3 913 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 SP4Q02446 784 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 IP6K1Q92551 441 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 HELLSQ9NRZ9 838 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 IVLP07476 585 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 AKNAD1Q5T1N1 836 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 SERPINA10Q9UK55 444 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 BIRC3Q13489 604 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 SAP30BPQ9UHR5 308 aaKnown RBP13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 ATP2C2O75185 946 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
KCNQ3-201ENST00000388996 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 MTRF1LQ9UGC7 380 aaKnown RBP13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 HOXC9P31274 260 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 SMC6Q96SB8 1091 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC114Q96M63 670 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 CHMLP26374 656 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 KIFAP3Q92845 792 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 IFNKQ9P0W0 207 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 PLCD1P51178 756 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 CNNM4Q6P4Q7 775 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 PLIN2Q99541 437 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
KCNQ3-201ENST00000388996 GAS8O95995 478 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CHMP2AO43633 222 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 TNNC1P63316 161 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 ANGEL1Q9UNK9 670 aaKnown RBP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 MAST3O60307 1309 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 SYNMO15061 1565 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 KRT5P13647 590 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CCT6AP40227 531 aaKnown RBP13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC6Q16204 474 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC121Q6ZUS5 278 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 LZTFL1Q9NQ48 299 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 TXNDC16Q9P2K2 825 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 TRAF5O00463 557 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 SV2BQ7L1I2 683 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
KCNQ3-201ENST00000388996 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 STX10O60499 249 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 RXRAP19793 462 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 STX17P56962 302 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 ARHGEF5Q12774 1597 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 ALDH3A1P30838 453 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 SELENOSQ9BQE4 189 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 VAV2P52735 878 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 CEP128Q6ZU80 1094 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 SNX16P57768 344 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 RILPL1Q5EBL4 403 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 ATRIPQ8WXE1 791 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 SLC8A3P57103 927 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 VWA3BQ502W6 1294 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 SMC5Q8IY18 1101 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 KDM5CP41229 1560 aa13.8□□□□□ -0.2
KCNQ3-201ENST00000388996 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms