RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 VAMP1P23763 118 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 USP11P51784 963 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 TSNAXIP1Q2TAA8 658 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 AKAP4Q5JQC9 854 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 HS2ST1Q7LGA3 356 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 TP53INP1Q96A56 240 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 MRRFQ96E11 262 aaKnown RBP5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
RNU6-39P-201ENST00000384344 SYNGAP1Q96PV0 1343 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 AOC2O75106 756 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 PAGE1O75459 146 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 TRIM37O94972 964 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 LIG3P49916 1009 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 MAP3K11Q16584 847 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 DZIP1LQ8IYY4 767 aaKnown RBP5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 CCDC86Q9H6F5 360 aaKnown RBP5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 PICK1Q9NRD5 415 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 AP4E1Q9UPM8 1137 aa5.54□□□□□ -1.52
RNU6-39P-201ENST00000384344 ADH5P11766 374 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 LIG1P18858 919 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 ZNF76P36508 570 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 SOX4Q06945 474 aaPredicted RBP5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 KIF4BQ2VIQ3 1234 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 DYMQ7RTS9 669 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 PDZD3Q86UT5 571 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 MEGF10Q96KG7 1140 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 ATXN3LQ9H3M9 355 aa5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 METTL5Q9NRN9 209 aaKnown RBP5.53□□□□□ -1.52
RNU6-39P-201ENST00000384344 SCAMP3O14828 347 aaKnown RBP5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 TIAF1O95411 115 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 ECEL1O95672 775 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 DLGAP3O95886 979 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 PROCP04070 461 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 BMP6P22004 513 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 RXRBP28702 533 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 PREPP48147 710 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 RBM25P49756 843 aaKnown RBP5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 ID3Q02535 119 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 ZNF252P-AS1Q0IIN9 211 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 AGMOQ6ZNB7 445 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 STK35Q8TDR2 534 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 MYRFLQ96LU7 910 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 WDR18Q9BV38 432 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 BACH2Q9BYV9 841 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 KCNF1Q9H3M0 494 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 PIDD1Q9HB75 910 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 GGT7Q9UJ14 662 aa5.52□□□□□ -1.53
RNU6-39P-201ENST00000384344 BPNT1O95861 308 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 ITGB2P05107 769 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 CTSBP07858 339 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 BMP3P12645 472 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 DRD2P14416 443 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 DOC2BQ14184 412 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 HDXQ7Z353 690 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 RNF34Q969K3 372 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 ELMO3Q96BJ8 720 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 TMEM74Q96NL1 305 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 UBL7Q96S82 380 aaPredicted RBP5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 RSRP1Q9BUV0 290 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 PCDHA4Q9UN74 947 aa5.51□□□□□ -1.53
RNU6-39P-201ENST00000384344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 E9PSI1 815 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 ZNF862O60290 1169 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 H2AFB1P0C5Y9 115 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 H2AFB2P0C5Z0 115 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 ASPAP45381 313 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 SNAP47Q5SQN1 464 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 GRIN3AQ8TCU5 1115 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 SSBP4Q9BWG4 385 aaPredicted RBP5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 STOML1Q9UBI4 398 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 RAXQ9Y2V3 346 aa5.5□□□□□ -1.53
RNU6-39P-201ENST00000384344 GSC2O15499 205 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 RECKO95980 971 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 RAB6AP20340 208 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 MAP7Q14244 749 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 PAOXQ6QHF9 649 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 PRR23CQ6ZRP0 262 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 BEND4Q6ZU67 534 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 CCDC84Q86UT8 332 aaPredicted RBP5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 TRIM42Q8IWZ5 723 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 FAM20CQ8IXL6 584 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 C2CD4AQ8NCU7 369 aaPredicted RBP5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 PHC3Q8NDX5 983 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 SSU72Q9NP77 194 aaKnown RBP5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 CRIM1Q9NZV1 1036 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 ACTL7BQ9Y614 415 aa5.49□□□□□ -1.53
RNU6-39P-201ENST00000384344 FAM95CA0A1B0GW59 222 aa5.48□□□□□ -1.53
RNU6-39P-201ENST00000384344 TMPRSS2O15393 492 aa5.48□□□□□ -1.53
RNU6-39P-201ENST00000384344 RNGTTO60942 597 aaKnown RBP5.48□□□□□ -1.53
RNU6-39P-201ENST00000384344 MAP4P27816 1152 aaKnown RBP5.48□□□□□ -1.53
RNU6-39P-201ENST00000384344 ERVK-24P63145 666 aa5.48□□□□□ -1.53
RNU6-39P-201ENST00000384344 LMNB2Q03252 620 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms