RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 GMPSP49915 693 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CLCN5P51795 746 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 POU4F1Q01851 419 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 TAF1CQ15572 869 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 DCAF6Q58WW2 860 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 RBM26Q5T8P6 1007 aaKnown RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 PPP2R2DQ66LE6 453 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CXXC5Q7LFL8 322 aaKnown RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 ARMC9Q7Z3E5 817 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 PRICKLE2Q7Z3G6 844 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 NGDNQ8NEJ9 315 aaKnown RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 JARID2Q92833 1246 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 PSMG3-AS1Q96PY0 264 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 SENP6Q9GZR1 1112 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 HMX1Q9NP08 348 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CFDP1Q9UEE9 299 aaPredicted RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CHIC2Q9UKJ5 165 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 BRCA1P38398 1863 aaKnown RBP1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 MYPNQ86TC9 1320 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 WDR17Q8IZU2 1322 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CELSR2Q9HCU4 2923 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 TJP1Q07157 1748 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 MON2Q7Z3U7 1717 aa1.83□□□□□ -2.12
RNU6-42P-201ENST00000384165 CSMD1Q96PZ7 3565 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 LAMA5O15230 3695 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 DICER1Q9UPY3 1922 aaKnown RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 CACNA1EQ15878 2313 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 SHROOM3Q8TF72 1996 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 DCDC2CA8MYV0 355 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 H3BQ06 376 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 SHOX2O60902 331 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 KCNK5O95279 499 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 PDGFBP01127 241 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 HNRNPA1P09651 372 aaKnown RBP eCLIP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TSPY4P0CV99 314 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TSPY10P0CW01 314 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 MYF5P13349 255 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 SLC5A1P13866 664 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 IL2RBP14784 551 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 ATN1P54259 1190 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 FPGSQ05932 587 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 DDR1Q08345 913 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TMEM62Q0P6H9 643 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 FKBP8Q14318 412 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TNIP1Q15025 636 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 CCDC6Q16204 474 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TAF1BQ53T94 588 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 PODNQ7Z5L7 613 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 ZBTB33Q86T24 672 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 FMNL3Q8IVF7 1028 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 LARGE2Q8N3Y3 721 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 SUMF1Q8NBK3 374 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 EMID1Q96A84 441 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.82□□□□□ -2.126e-22■■■■■ 41
RNU6-42P-201ENST00000384165 CDHR5Q9HBB8 845 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 GMEB2Q9UKD1 530 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 ATP11BQ9Y2G3 1177 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 MSRB2Q9Y3D2 182 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 HEMK1Q9Y5R4 338 aaPredicted RBP1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 NBASA2RRP1 2371 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 NHSQ6T4R5 1651 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 HIVEP3Q5T1R4 2406 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 ADGRF5Q8IZF2 1346 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 USP31Q70CQ4 1352 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 ROBO2Q9HCK4 1378 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 MBD5Q9P267 1494 aa1.82□□□□□ -2.12
RNU6-42P-201ENST00000384165 TGP01266 2768 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 LMO7Q8WWI1 1683 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 LTN1O94822 1766 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 C3orf80F5H4A9 247 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 POLRMTO00411 1230 aaKnown RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 KCNAB3O43448 404 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 FOXD2O60548 495 aaPredicted RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 USP2O75604 605 aaPredicted RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 GCP02774 474 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 ZBTB48P10074 688 aaPredicted RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 ELNP15502 786 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 RAG1P15918 1043 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 TM4SF1P30408 202 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 ADSSP30520 456 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 PTPN12Q05209 780 aaKnown RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 TRIM32Q13049 653 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 TMEM240Q5SV17 173 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 SNRNP48Q6IEG0 339 aaKnown RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 PSAPL1Q6NUJ1 521 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 TICAM1Q8IUC6 712 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 MICALL2Q8IY33 904 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 NIM1KQ8IY84 436 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 DTWD2Q8NBA8 298 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 LRRN4CLQ8ND94 238 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 FEZF2Q8TBJ5 459 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 PXYLP1Q8TE99 480 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 MTIF3Q9H2K0 278 aaKnown RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 CCDC86Q9H6F5 360 aaKnown RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 CERS4Q9HA82 394 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 CLDND1Q9NY35 253 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 LMCD1Q9NZU5 365 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 PLEKHB1Q9UF11 243 aaPredicted RBP1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 OGDHLQ9ULD0 1010 aa1.81□□□□□ -2.12
RNU6-42P-201ENST00000384165 KCNH4Q9UQ05 1017 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms