RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-202ENST00000381208 MTX1Q13505 466 aa16.12■□□□□ 0.17
RPAIN-202ENST00000381208 AKAP2Q9Y2D5 859 aa16.12■□□□□ 0.17
RPAIN-202ENST00000381208 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-202ENST00000381208 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
RPAIN-202ENST00000381208 GTF2A2P52657 109 aa16.11■□□□□ 0.17
RPAIN-202ENST00000381208 FBXO46Q6PJ61 603 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-202ENST00000381208 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
RPAIN-202ENST00000381208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPAIN-202ENST00000381208 OPTNQ96CV9 577 aa16.11■□□□□ 0.17
RPAIN-202ENST00000381208 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
RPAIN-202ENST00000381208 IGF2BP3O00425 579 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPAIN-202ENST00000381208 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
RPAIN-202ENST00000381208 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-202ENST00000381208 SLF2Q8IX21 1173 aa16.1■□□□□ 0.17
RPAIN-202ENST00000381208 ELP3Q9H9T3 547 aa16.1■□□□□ 0.17
RPAIN-202ENST00000381208 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-202ENST00000381208 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
RPAIN-202ENST00000381208 GNAI2P04899 355 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 GJA5P36382 358 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 VGLL4Q14135 290 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 FAM151AQ8WW52 585 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
RPAIN-202ENST00000381208 PA2G4Q9UQ80 394 aaKnown RBP16.09■□□□□ 0.17
RPAIN-202ENST00000381208 SPDYE5A6NIY4 337 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 TRIM27P14373 513 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 CACNB3P54284 484 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.16
RPAIN-202ENST00000381208 SPTY2D1Q68D10 685 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-202ENST00000381208 CCDC102BQ68D86 513 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 ERO1BQ86YB8 467 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
RPAIN-202ENST00000381208 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
RPAIN-202ENST00000381208 PRDX5P30044 214 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 PHKA1P46020 1223 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 WRNIP1Q96S55 665 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 DAGLAQ9Y4D2 1042 aa16.07■□□□□ 0.16
RPAIN-202ENST00000381208 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 CETPP11597 493 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 CCL15Q16663 113 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 CDAN1Q8IWY9 1227 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 FRAT1Q92837 279 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-202ENST00000381208 ZFYVE28Q9HCC9 887 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 LAMB1P07942 1786 aa16.06■□□□□ 0.16
RPAIN-202ENST00000381208 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 SP3Q02447 781 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 CRHR2Q13324 411 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 CDC42EP5Q6NZY7 148 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 DCBLD2Q96PD2 775 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 PTPN18Q99952 460 aa16.05■□□□□ 0.16
RPAIN-202ENST00000381208 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
RPAIN-202ENST00000381208 PPATQ06203 517 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 G3BP1Q13283 466 aaKnown RBP eCLIP16.04■□□□□ 0.16
RPAIN-202ENST00000381208 PPIL2Q13356 520 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
RPAIN-202ENST00000381208 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-202ENST00000381208 XAGE2Q96GT9 111 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 TRIM17Q9Y577 477 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
RPAIN-202ENST00000381208 BCAR3O75815 825 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 ADORA1P30542 326 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 SOX10P56693 466 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 TIMM10P62072 90 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 TFCP2Q12800 502 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-202ENST00000381208 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 IDI2Q9BXS1 227 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 ABCF2Q9UG63 623 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 GAKO14976 1311 aa16.03■□□□□ 0.16
RPAIN-202ENST00000381208 ENTPD3O75355 529 aa16.02■□□□□ 0.16
RPAIN-202ENST00000381208 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-202ENST00000381208 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
RPAIN-202ENST00000381208 EFCC1Q9HA90 598 aa16.02■□□□□ 0.16
RPAIN-202ENST00000381208 ZNF112Q9UJU3 913 aa16.02■□□□□ 0.16
RPAIN-202ENST00000381208 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.16
RPAIN-202ENST00000381208 TCP10Q12799 353 aa16.01■□□□□ 0.15
RPAIN-202ENST00000381208 NOL9Q5SY16 702 aaKnown RBP16.01■□□□□ 0.15
RPAIN-202ENST00000381208 DIEXFQ68CQ4 756 aaKnown RBP16.01■□□□□ 0.15
RPAIN-202ENST00000381208 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
RPAIN-202ENST00000381208 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
RPAIN-202ENST00000381208 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-202ENST00000381208 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
RPAIN-202ENST00000381208 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
RPAIN-202ENST00000381208 OTOFQ9HC10 1997 aa16.01■□□□□ 0.15
RPAIN-202ENST00000381208 IRF6O14896 467 aa16■□□□□ 0.15
RPAIN-202ENST00000381208 IGSF3O75054 1194 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms