RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CLIC4Q9Y696 253 aa15.95■□□□□ 0.14
SDC1-202ENST00000381150 CYP21A2P08686 494 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 HAND2P61296 217 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 PPP2R3AQ06190 1150 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 KIAA1468Q9P260 1216 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 TMEM232C9JQI7 657 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 ADKP55263 362 aaKnown RBP15.94■□□□□ 0.14
SDC1-202ENST00000381150 TICAM2Q86XR7 235 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 IRX2Q9BZI1 471 aaPredicted RBP15.94■□□□□ 0.14
SDC1-202ENST00000381150 ADAM21Q9UKJ8 722 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 LAMA4Q16363 1823 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
SDC1-202ENST00000381150 PARD6BQ9BYG5 372 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 RHOXF2BP0C7M4 288 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 WDR24Q96S15 920 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 RHOXF2Q9BQY4 288 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
SDC1-202ENST00000381150 PAG1Q9NWQ8 432 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 CPLX1O14810 134 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 RABEP2Q9H5N1 569 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
SDC1-202ENST00000381150 CSF1RP07333 972 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 CC2D1AQ6P1N0 951 aaPredicted RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 GOLGA6L1Q8N7Z2 621 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 DRC1Q96MC2 740 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 PLA2G12BQ9BX93 195 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 PDE11AQ9HCR9 933 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 SPEF2Q9C093 1822 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 GOLIM4O00461 696 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 TBC1D8O95759 1140 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 KRT32Q14532 448 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 NSUN7Q8NE18 718 aaKnown RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 BTG4Q9NY30 223 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 ATP2B1P20020 1258 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 STOX1Q6ZVD7 989 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 HELLSQ9NRZ9 838 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 IMPACTQ9P2X3 320 aa15.92■□□□□ 0.14
SDC1-202ENST00000381150 RRP15Q9Y3B9 282 aaKnown RBP15.92■□□□□ 0.14
SDC1-202ENST00000381150 TADA3O75528 432 aa15.91■□□□□ 0.14
SDC1-202ENST00000381150 ZNF202O95125 648 aa15.91■□□□□ 0.14
SDC1-202ENST00000381150 PCCAP05165 728 aaPredicted RBP15.91■□□□□ 0.14
SDC1-202ENST00000381150 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
SDC1-202ENST00000381150 OSBPL5Q9H0X9 879 aaPredicted RBP15.91■□□□□ 0.14
SDC1-202ENST00000381150 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.91■□□□□ 0.14
SDC1-202ENST00000381150 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 ZSCAN12O43309 604 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 FAM53CQ9NYF3 392 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 ZRANB2O95218 330 aaKnown RBP eCLIP15.9■□□□□ 0.14
SDC1-202ENST00000381150 DHX58Q96C10 678 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 FAM89AQ96GI7 184 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 BCL9O00512 1426 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 SPTLC2O15270 562 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 CCP110O43303 1012 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 CCDC93Q567U6 631 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 HSP90B2PQ58FF3 399 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 FOXR1Q6PIV2 292 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 PPP2R2CQ9Y2T4 447 aa15.9■□□□□ 0.14
SDC1-202ENST00000381150 ADD1P35611 737 aaKnown RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 PNOCQ13519 176 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 HLFQ16534 295 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 LONRF2Q1L5Z9 754 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 OLFM4Q6UX06 510 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 DSCC1Q9BVC3 393 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 FANCLQ9NW38 375 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 N4BP1O75113 896 aaKnown RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 TFRCP02786 760 aaKnown RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 FAM193AP78312 1265 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 E2F4Q16254 413 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
SDC1-202ENST00000381150 PARP3Q9Y6F1 533 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 MAP3K15Q6ZN16 1313 aa15.89■□□□□ 0.13
SDC1-202ENST00000381150 H3BQF6 201 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 RXRAP19793 462 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 HSP90AB3PQ58FF7 597 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 CCDC158Q5M9N0 1113 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 FANCGO15287 622 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 IFIT1P09914 478 aaKnown RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 TRMT44Q8IYL2 757 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms