RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SLC4A8Q2Y0W8 1093 aa9.5□□□□□ -0.89
ERCC8-202ENST00000381118 CCDC93Q567U6 631 aa9.5□□□□□ -0.89
ERCC8-202ENST00000381118 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
ERCC8-202ENST00000381118 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
ERCC8-202ENST00000381118 INCENPQ9NQS7 918 aa9.5□□□□□ -0.89
ERCC8-202ENST00000381118 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 ZBTB22O15209 634 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 DTNBO60941 627 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 LARGE1O95461 756 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 Q6ZUG5 572 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 CERS5Q8N5B7 392 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 TBC1D22AQ8WUA7 517 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-202ENST00000381118 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
ERCC8-202ENST00000381118 FAM205AQ6ZU69 1335 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 PTGER2P43116 358 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 GSTO1P78417 241 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 PODNQ7Z5L7 613 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 RALYLQ86SE5 291 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 NOL10Q9BSC4 688 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 ZNF277Q9NRM2 450 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 TOMM22Q9NS69 142 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 NAV1Q8NEY1 1877 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 ZNF646O15015 1829 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 LAMB1P07942 1786 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 CYP2D7A0A087X1C5 515 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 SMIM22K7EJ46 135 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 HOXD11P31277 338 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 BTDP43251 543 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 SCNN1DP51172 638 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 KIAA2012Q0VF49 1180 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 STK3Q13188 491 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 DALRD3Q5D0E6 543 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 RTKN2Q8IZC4 609 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 SUPT20HQ8NEM7 779 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 NCOA7Q8NI08 942 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
ERCC8-202ENST00000381118 BCS1LQ9Y276 419 aa9.48□□□□□ -0.89
ERCC8-202ENST00000381118 ZMYM6O95789 1325 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 NEDD4P46934 1319 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 FER1L6Q2WGJ9 1857 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 B4E1Z4 1266 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 BAG3O95817 575 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 USP5P45974 858 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 TRDNQ13061 729 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 ALX1Q15699 326 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 ME3Q16798 604 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 RRP12Q5JTH9 1297 aaKnown RBP9.47□□□□□ -0.89
ERCC8-202ENST00000381118 ILDR2Q71H61 639 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 KIAA0825Q8IV33 1275 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 BRF1Q92994 677 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 LDHCP07864 332 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 EVX2Q03828 476 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 PPARAQ07869 468 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 ANKRD1Q15327 319 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 NECAB1Q8N987 351 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 NLGN2Q8NFZ4 835 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 DCP1AQ9NPI6 582 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-202ENST00000381118 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-202ENST00000381118 MYH1P12882 1939 aa9.47□□□□□ -0.89
ERCC8-202ENST00000381118 TIAM2Q8IVF5 1701 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 COL4A5P29400 1685 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 YDJCA8MPS7 323 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 USP17L12C9JPN9 530 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 USP17L21D6R901 530 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.89
ERCC8-202ENST00000381118 NBR1Q14596 966 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 MFSD6Q6ZSS7 791 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.89
ERCC8-202ENST00000381118 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.89
ERCC8-202ENST00000381118 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.89
ERCC8-202ENST00000381118 PSME4Q14997 1843 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 FOCADQ5VW36 1801 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 PRC1O43663 620 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 MCM5P33992 734 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 CUL4AQ13619 759 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 AKNAD1Q5T1N1 836 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 STRIP1Q5VSL9 837 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 CTR9Q6PD62 1173 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 PSMD1Q99460 953 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms