RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CNNM2Q9H8M5 875 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 NCOA5Q9HCD5 579 aaKnown RBP22.6■■□□□ 1.21
GMDS-201ENST00000380805 NEDD4P46934 1319 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 KLF18A0A0U1RQI7 1052 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 GRAPQ13588 217 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 CYB5R4Q7L1T6 521 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 TTC6Q86TZ1 520 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 GRAPLQ8TC17 118 aaPredicted RBP22.6■■□□□ 1.21
GMDS-201ENST00000380805 STAG1Q8WVM7 1258 aa22.6■■□□□ 1.21
GMDS-201ENST00000380805 RIOK1Q9BRS2 568 aaKnown RBP22.6■■□□□ 1.21
GMDS-201ENST00000380805 SYCE3A1L190 88 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 GYS1P13807 737 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 CYP7A1P22680 504 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 CRY2Q49AN0 593 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 ADGRA1Q86SQ6 560 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 SGMS1Q86VZ5 419 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 VPS37DQ86XT2 251 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 COL23A1Q86Y22 540 aaPredicted RBP22.59■■□□□ 1.21
GMDS-201ENST00000380805 PDGFDQ9GZP0 370 aaPredicted RBP22.59■■□□□ 1.21
GMDS-201ENST00000380805 SLC4A4Q9Y6R1 1079 aa22.59■■□□□ 1.21
GMDS-201ENST00000380805 NID2Q14112 1375 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 H3BQV1 296 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 FDPSP14324 419 aaKnown RBP22.58■■□□□ 1.21
GMDS-201ENST00000380805 AKNAD1Q5T1N1 836 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 CCDC183Q5T5S1 534 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 IFFO2Q5TF58 517 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 PRR5LQ6MZQ0 368 aa22.58■■□□□ 1.21
GMDS-201ENST00000380805 IQSEC3Q9UPP2 1182 aaPredicted RBP22.58■■□□□ 1.21
GMDS-201ENST00000380805 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 GOLGA8BA8MQT2 603 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 KLRK1P26718 216 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 HIBADHP31937 336 aaKnown RBP22.57■■□□□ 1.2
GMDS-201ENST00000380805 LIFRP42702 1097 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 NKX2-3Q8TAU0 364 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 IGDCC4Q8TDY8 1250 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 KRT23Q9C075 422 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 ECM29Q5VYK3 1845 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 LAMB1P07942 1786 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 DUOX1Q9NRD9 1551 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 B4E1Z4 1266 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 PRKAB2O43741 272 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 LETM1O95202 739 aaPredicted RBP22.57■■□□□ 1.2
GMDS-201ENST00000380805 R3HDM1Q15032 1099 aaKnown RBP22.57■■□□□ 1.2
GMDS-201ENST00000380805 C15orf52Q6ZUT6 534 aaKnown RBP22.57■■□□□ 1.2
GMDS-201ENST00000380805 CCDC24Q8N4L8 307 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 RAI14Q9P0K7 980 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 ABCF2Q9UG63 623 aa22.57■■□□□ 1.2
GMDS-201ENST00000380805 MAGEB6P1A0A0J9YX57 407 aa22.56■■□□□ 1.2
GMDS-201ENST00000380805 NASPP49321 788 aaPredicted RBP22.56■■□□□ 1.2
GMDS-201ENST00000380805 ATL3Q6DD88 541 aa22.56■■□□□ 1.2
GMDS-201ENST00000380805 ZNF384Q8TF68 577 aa22.56■■□□□ 1.2
GMDS-201ENST00000380805 LEMD3Q9Y2U8 911 aa22.56■■□□□ 1.2
GMDS-201ENST00000380805 TACC3Q9Y6A5 838 aa22.56■■□□□ 1.2
GMDS-201ENST00000380805 NRXN2Q9P2S2 1712 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 TDO2P48775 406 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 FAM173BQ6P4H8 233 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 GIMAP6Q6P9H5 292 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 MIGA1Q8NAN2 632 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 RBSNQ9H1K0 784 aa22.55■■□□□ 1.2
GMDS-201ENST00000380805 PSDA5PKW4 1024 aaPredicted RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 NSUN4Q96CB9 384 aaKnown RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 BRIP1Q9BX63 1249 aa22.54■■□□□ 1.2
GMDS-201ENST00000380805 LY9Q9HBG7 655 aa22.54■■□□□ 1.2
GMDS-201ENST00000380805 LTBP1Q14766 1721 aa22.54■■□□□ 1.2
GMDS-201ENST00000380805 ADD1P35611 737 aaKnown RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 APOA5Q6Q788 366 aa22.54■■□□□ 1.2
GMDS-201ENST00000380805 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
GMDS-201ENST00000380805 LEO1Q8WVC0 666 aaPredicted RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 RNF41Q9H4P4 317 aaPredicted RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
GMDS-201ENST00000380805 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
GMDS-201ENST00000380805 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 XDHP47989 1333 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 NPHP1O15259 732 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 CTDSPL2Q05D32 466 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 ZSWIM5Q9P217 1185 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 CFAP45Q9UL16 551 aa22.53■■□□□ 1.2
GMDS-201ENST00000380805 QSER1Q2KHR3 1735 aa22.52■■□□□ 1.2
GMDS-201ENST00000380805 FLAD1Q8NFF5 587 aa22.52■■□□□ 1.2
GMDS-201ENST00000380805 SPATA32Q96LK8 384 aa22.52■■□□□ 1.2
GMDS-201ENST00000380805 SERPINB2P05120 415 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 RCAN1P53805 252 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 ST5P78524 1137 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 PPARAQ07869 468 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 PPP1R9BQ96SB3 815 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 KLRG2A4D1S0 409 aaPredicted RBP22.51■■□□□ 1.19
GMDS-201ENST00000380805 KDM4AO75164 1064 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 PCP11498 1178 aaKnown RBP22.51■■□□□ 1.19
GMDS-201ENST00000380805 TXNRD3Q86VQ6 643 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 TSPY26PQ9H489 355 aa22.51■■□□□ 1.19
GMDS-201ENST00000380805 CDKL5O76039 1030 aa22.5■■□□□ 1.19
GMDS-201ENST00000380805 FGRP09769 529 aa22.5■■□□□ 1.19
GMDS-201ENST00000380805 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
GMDS-201ENST00000380805 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
GMDS-201ENST00000380805 MECOMQ03112 1051 aa22.5■■□□□ 1.19
GMDS-201ENST00000380805 CCDC173Q0VFZ6 552 aa22.5■■□□□ 1.19
GMDS-201ENST00000380805 TMEM67Q5HYA8 995 aa22.5■■□□□ 1.19
GMDS-201ENST00000380805 CPLX1O14810 134 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms