RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NR5A1Q13285 461 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 TRMT44Q8IYL2 757 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 PLIN2Q99541 437 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 NEDD4P46934 1319 aa12.66□□□□□ -0.38
DNMT3A-203ENST00000380746 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 ADD2P35612 726 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 SIK1P57059 783 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 RTN1Q16799 776 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 LPIN2Q92539 896 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 ANTXR2P58335 489 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 CCDC112Q8NEF3 446 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 CDKL5O76039 1030 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 CHRNDQ07001 517 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-203ENST00000380746 PFKFB1P16118 471 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 UQCRFS1P1P0C7P4 283 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 CASP1P29466 404 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 EEF2KMTQ96G04 330 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 MAPK8IP1Q9UQF2 711 aa12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-203ENST00000380746 UBN2Q6ZU65 1347 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 CIAO1O76071 339 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 PTPN14Q15678 1187 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 KCNB2Q92953 911 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 DHX58Q96C10 678 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 F8W031 263 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 FOXN1O15353 648 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 ATP1A3P13637 1013 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 KCNG4Q8TDN1 519 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 ZPR1O75312 459 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 SFPQP23246 707 aaKnown RBP eCLIP12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 ZNF174Q15697 407 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 XPO4Q9C0E2 1151 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
DNMT3A-203ENST00000380746 GNPATO15228 680 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 POLR2DO15514 142 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 IPO4Q8TEX9 1081 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 USP27XA6NNY8 438 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 NMT2O60551 498 aa12.62□□□□□ -0.39
DNMT3A-203ENST00000380746 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 CDC25AP30304 524 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 STRBPQ96SI9 672 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 FUCA2Q9BTY2 467 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 ELP1O95163 1332 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 USP17L21D6R901 530 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 CTAGE5O15320 804 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 USP5P45974 858 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 DZIP1Q86YF9 867 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 PDCL2Q8N4E4 241 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 SAP30BPQ9UHR5 308 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 UBASH3AP57075 661 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 AKNAD1Q5T1N1 836 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
DNMT3A-203ENST00000380746 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
DNMT3A-203ENST00000380746 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms