RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ATP6V1AP38606 617 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 SYNE3Q6ZMZ3 975 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 PRIMPOLQ96LW4 560 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 ANO10Q9NW15 660 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 BECN2A8MW95 431 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 BCAMP50895 628 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 LY9Q9HBG7 655 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 CCDC87Q9NVE4 849 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 ECM29Q5VYK3 1845 aa23.32■■□□□ 1.32
EBF1-202ENST00000380654 CHD4Q14839 1912 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 PRKAB2O43741 272 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 ANO1Q5XXA6 986 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 CACTINQ8WUQ7 758 aaKnown RBP23.31■■□□□ 1.32
EBF1-202ENST00000380654 UTP14AQ9BVJ6 771 aaKnown RBP23.31■■□□□ 1.32
EBF1-202ENST00000380654 PATL2C9JE40 543 aaKnown RBP23.31■■□□□ 1.32
EBF1-202ENST00000380654 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
EBF1-202ENST00000380654 SARM1Q6SZW1 724 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 NFXL1Q6ZNB6 911 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 AOPEPQ8N6M6 819 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 NAPBQ9H115 298 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 PDCL3Q9H2J4 239 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 ZSWIM5Q9P217 1185 aa23.31■■□□□ 1.32
EBF1-202ENST00000380654 MYH14Q7Z406 1995 aaKnown RBP23.3■■□□□ 1.32
EBF1-202ENST00000380654 RANBP6O60518 1105 aaKnown RBP23.3■■□□□ 1.32
EBF1-202ENST00000380654 MAP3K12Q12852 859 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 VPS37DQ86XT2 251 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 STK11IPQ8N1F8 1099 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 FAM217BQ9NTX9 383 aaPredicted RBP23.3■■□□□ 1.32
EBF1-202ENST00000380654 ZBTB43O43298 467 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 WDHD1O75717 1129 aaPredicted RBP23.3■■□□□ 1.32
EBF1-202ENST00000380654 ITPK1Q13572 414 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 ARID5BQ14865 1188 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 AXDND1Q5T1B0 1012 aaPredicted RBP23.3■■□□□ 1.32
EBF1-202ENST00000380654 KRT40Q6A162 431 aa23.3■■□□□ 1.32
EBF1-202ENST00000380654 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 CAMTA2O94983 1202 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 NTRK3Q16288 839 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 TMEM87BQ96K49 555 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 PHLPP1O60346 1717 aa23.29■■□□□ 1.32
EBF1-202ENST00000380654 GSG1L2A8MUP6 293 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 ALX1Q15699 326 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 DPCR1Q3MIW9 517 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 CEP57L1Q8IYX8 460 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 LCORLQ8N3X6 602 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 AK7Q96M32 723 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 KIAA1468Q9P260 1216 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 COL4A1P02462 1669 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 CDC25BP30305 580 aa23.28■■□□□ 1.32
EBF1-202ENST00000380654 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 GOLGA8AA7E2F4 631 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 ZNF202O95125 648 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 SIK1P57059 783 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 DDB1Q16531 1140 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 IQSEC3Q9UPP2 1182 aaPredicted RBP23.27■■□□□ 1.32
EBF1-202ENST00000380654 NIP7Q9Y221 180 aaKnown RBP eCLIP23.27■■□□□ 1.32
EBF1-202ENST00000380654 BIN1O00499 593 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 CDKL5O76039 1030 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 PFKFB1P16118 471 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 ZKSCAN3Q9BRR0 538 aa23.27■■□□□ 1.32
EBF1-202ENST00000380654 IFIT3O14879 490 aaKnown RBP23.26■■□□□ 1.31
EBF1-202ENST00000380654 RRP12Q5JTH9 1297 aaKnown RBP23.26■■□□□ 1.31
EBF1-202ENST00000380654 SGMS1Q86VZ5 419 aa23.26■■□□□ 1.31
EBF1-202ENST00000380654 MRFAP1L1Q96HT8 127 aa23.26■■□□□ 1.31
EBF1-202ENST00000380654 NTSR2O95665 410 aa23.26■■□□□ 1.31
EBF1-202ENST00000380654 IARSP41252 1262 aaKnown RBP23.26■■□□□ 1.31
EBF1-202ENST00000380654 SLC39A14Q15043 492 aa23.26■■□□□ 1.31
EBF1-202ENST00000380654 CCDC152Q4G0S7 254 aa23.26■■□□□ 1.31
EBF1-202ENST00000380654 MARCH10Q8NA82 808 aaPredicted RBP23.26■■□□□ 1.31
EBF1-202ENST00000380654 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
EBF1-202ENST00000380654 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
EBF1-202ENST00000380654 CHRNDQ07001 517 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 GNL2Q13823 731 aaKnown RBP23.25■■□□□ 1.31
EBF1-202ENST00000380654 AKNAD1Q5T1N1 836 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 CPLX2Q6PUV4 134 aaKnown RBP23.25■■□□□ 1.31
EBF1-202ENST00000380654 C16orf45Q96MC5 204 aaPredicted RBP23.25■■□□□ 1.31
EBF1-202ENST00000380654 SLC26A6Q9BXS9 759 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 TOMM22Q9NS69 142 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 SLC12A7Q9Y666 1083 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 SLC4A4Q9Y6R1 1079 aa23.25■■□□□ 1.31
EBF1-202ENST00000380654 CMA1P23946 247 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.31
EBF1-202ENST00000380654 SPATA31A1Q5TZJ5 1347 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 SLC3A2P08195 630 aaKnown RBP23.24■■□□□ 1.31
EBF1-202ENST00000380654 TDO2P48775 406 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 ISM2Q6H9L7 571 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 MFSD6Q6ZSS7 791 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 LRRC8AQ8IWT6 810 aa23.24■■□□□ 1.31
EBF1-202ENST00000380654 NAT10Q9H0A0 1025 aaKnown RBP23.24■■□□□ 1.31
EBF1-202ENST00000380654 CCDC69A6NI79 296 aa23.23■■□□□ 1.31
EBF1-202ENST00000380654 RIOK3O14730 519 aaKnown RBP23.23■■□□□ 1.31
EBF1-202ENST00000380654 GUCY1A2P33402 732 aa23.23■■□□□ 1.31
EBF1-202ENST00000380654 LIFRP42702 1097 aa23.23■■□□□ 1.31
EBF1-202ENST00000380654 FILIP1Q7Z7B0 1213 aa23.23■■□□□ 1.31
EBF1-202ENST00000380654 TAF1P21675 1872 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms