RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 IGDCC4Q8TDY8 1250 aa14.72□□□□□ -0.05
VPS16-202ENST00000380445 BCL2L12Q9HB09 334 aa14.72□□□□□ -0.05
VPS16-202ENST00000380445 CTAGE5O15320 804 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 KCNQ4P56696 695 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 GUCY1B3Q02153 619 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 CEBPZQ03701 1054 aaKnown RBP14.71□□□□□ -0.05
VPS16-202ENST00000380445 CAMK4Q16566 473 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 APOA5Q6Q788 366 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 STAG1Q8WVM7 1258 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 USP28Q96RU2 1077 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 NEDD4P46934 1319 aa14.71□□□□□ -0.05
VPS16-202ENST00000380445 ZBTB43O43298 467 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 KDM4AO75164 1064 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 PTMAP06454 111 aaKnown RBP14.71□□□□□ -0.06
VPS16-202ENST00000380445 CYP7A1P22680 504 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 RPS8P62241 208 aaKnown RBP14.71□□□□□ -0.06
VPS16-202ENST00000380445 LCORLQ8N3X6 602 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 ANKRD2Q9GZV1 360 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 RTEL1Q9NZ71 1219 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 RAI14Q9P0K7 980 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 ABCF2Q9UG63 623 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 NHSQ6T4R5 1651 aa14.71□□□□□ -0.06
VPS16-202ENST00000380445 NR1I2O75469 434 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 GYG1P46976 350 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 CCDC73Q6ZRK6 1079 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 C3orf67Q6ZVT6 689 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 TMTC2Q8N394 836 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 FAM200AQ8TCP9 573 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 BTAF1O14981 1849 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 THSD7AQ9UPZ6 1657 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 CCDC69A6NI79 296 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 IFIT3O14879 490 aaKnown RBP14.7□□□□□ -0.06
VPS16-202ENST00000380445 CAVIN2O95810 425 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 TYRO3Q06418 890 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 SASS6Q6UVJ0 657 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 LY9Q9HBG7 655 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 ZSWIM5Q9P217 1185 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 ZKSCAN5Q9Y2L8 839 aa14.7□□□□□ -0.06
VPS16-202ENST00000380445 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 MAGEB6P1A0A0J9YX57 407 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 ERICH2A1L162 156 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 PPFIA3O75145 1194 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 CTDSPL2Q05D32 466 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 CCAR1Q8IX12 1150 aaKnown RBP14.69□□□□□ -0.06
VPS16-202ENST00000380445 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
VPS16-202ENST00000380445 USP25Q9UHP3 1055 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 SLC12A7Q9Y666 1083 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 ME1P48163 572 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 TMED8Q6PL24 325 aaPredicted RBP14.69□□□□□ -0.06
VPS16-202ENST00000380445 KCNG4Q8TDN1 519 aa14.69□□□□□ -0.06
VPS16-202ENST00000380445 PDS5AQ29RF7 1337 aaKnown RBP14.69□□□□□ -0.06
VPS16-202ENST00000380445 YEATS4O95619 227 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 C4AP0C0L4 1744 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 C4BP0C0L5 1744 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 PTF1AQ7RTS3 328 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 MIGA1Q8NAN2 632 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
VPS16-202ENST00000380445 IQSEC3Q9UPP2 1182 aaPredicted RBP14.68□□□□□ -0.06
VPS16-202ENST00000380445 CHD4Q14839 1912 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 A0A1B0GUL6 1792 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 GOLGA8AA7E2F4 631 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 PRKAB2O43741 272 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 ADCY5O95622 1261 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 MICU3Q86XE3 530 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 RAB11FIP4Q86YS3 637 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 CKAP2LQ8IYA6 745 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 POLR3EQ9NVU0 708 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
VPS16-202ENST00000380445 COL24A1Q17RW2 1714 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 ZNF500O60304 480 aaPredicted RBP14.68□□□□□ -0.06
VPS16-202ENST00000380445 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
VPS16-202ENST00000380445 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 WASF1Q92558 559 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 ALG1Q9BT22 464 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 TOMM22Q9NS69 142 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 MRVI1Q9Y6F6 885 aa14.68□□□□□ -0.06
VPS16-202ENST00000380445 NPHP1O15259 732 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 RCAN1P53805 252 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 FAM160A1Q05DH4 1040 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 PPARAQ07869 468 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 TRIM29Q14134 588 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 SF3A1Q15459 793 aaKnown RBP14.67□□□□□ -0.06
VPS16-202ENST00000380445 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
VPS16-202ENST00000380445 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 CCDC196A0A1B0GTZ2 297 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 KINO60870 393 aaKnown RBP14.67□□□□□ -0.06
VPS16-202ENST00000380445 RFC4P35249 363 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 WTAPQ15007 396 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 STK38Q15208 465 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 GJD4Q96KN9 370 aaPredicted RBP14.67□□□□□ -0.06
VPS16-202ENST00000380445 STK36Q9NRP7 1315 aa14.67□□□□□ -0.06
VPS16-202ENST00000380445 A0A1W2PQ27 194 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 A0A1W2PQ64 194 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 A0A1W2PQD8 194 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms