RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 BAG3O95817 575 aa16.89■□□□□ 0.3
HERPUD1-203ENST00000379792 TMED8Q6PL24 325 aaPredicted RBP16.89■□□□□ 0.3
HERPUD1-203ENST00000379792 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.3
HERPUD1-203ENST00000379792 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 MAP4K1Q92918 833 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 PSME4Q14997 1843 aa16.89■□□□□ 0.29
HERPUD1-203ENST00000379792 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 PPP4CP60510 307 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 ADAMTSL1Q8N6G6 1762 aa16.88■□□□□ 0.29
HERPUD1-203ENST00000379792 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 RBM26Q5T8P6 1007 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 NMRK2Q9NPI5 230 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 PATL2C9JE40 543 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 RHBDL3P58872 404 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 MICALL2Q8IY33 904 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 GPC2Q8N158 579 aa16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-203ENST00000379792 FGAP02671 866 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 GNAT2P19087 354 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 TEX11Q8IYF3 940 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
HERPUD1-203ENST00000379792 EGFRP00533 1210 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 CACNB3P54284 484 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 DPF2Q92785 391 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-203ENST00000379792 TOMM70O94826 608 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 PLCG2P16885 1265 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 USP5P45974 858 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 SLC27A2O14975 620 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 HSPA4P34932 840 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 TDO2P48775 406 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 TBC1D10BQ4KMP7 808 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 CREB3L3Q68CJ9 461 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 NAPBQ9H115 298 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
HERPUD1-203ENST00000379792 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 EPS15P42566 896 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 HAND2P61296 217 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 PICALMQ13492 652 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 GPRC5DQ9NZD1 345 aa16.83■□□□□ 0.28
HERPUD1-203ENST00000379792 CYP2D7A0A087X1C5 515 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 H7C1D1 291 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 SMIM22K7EJ46 135 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 WDHD1O75717 1129 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 MCCP23508 829 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 NFIAQ12857 509 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 ALX1Q15699 326 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 EPB41L2O43491 1005 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 CYP2D6P10635 497 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 EVX2Q03828 476 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 ZBED3Q96IU2 234 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
HERPUD1-203ENST00000379792 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms