RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LRSAM1Q6UWE0 723 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 ZNF804AQ7Z570 1209 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 PDLIM2Q96JY6 352 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 MTMR6Q9Y217 621 aa22.84■■□□□ 1.25
SSU72-204ENST00000378726 PDCP20941 246 aa22.83■■□□□ 1.25
SSU72-204ENST00000378726 PRDX5P30044 214 aa22.83■■□□□ 1.25
SSU72-204ENST00000378726 DYNLL1P63167 89 aaKnown RBP22.83■■□□□ 1.25
SSU72-204ENST00000378726 EN1Q05925 392 aaPredicted RBP22.83■■□□□ 1.25
SSU72-204ENST00000378726 EZH2Q15910 746 aaKnown RBP22.83■■□□□ 1.25
SSU72-204ENST00000378726 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
SSU72-204ENST00000378726 INCENPQ9NQS7 918 aa22.83■■□□□ 1.25
SSU72-204ENST00000378726 PDIA4P13667 645 aaKnown RBP22.82■■□□□ 1.24
SSU72-204ENST00000378726 EVCP57679 992 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 CCT2P78371 535 aaKnown RBP22.82■■□□□ 1.24
SSU72-204ENST00000378726 CTDSPL2Q05D32 466 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 SDR42E1Q8WUS8 393 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 JAK2O60674 1132 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 PODXL2Q9NZ53 605 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 WDR19Q8NEZ3 1342 aa22.82■■□□□ 1.24
SSU72-204ENST00000378726 F13A1P00488 732 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 SRGNP10124 158 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 SPTY2D1Q68D10 685 aaPredicted RBP22.81■■□□□ 1.24
SSU72-204ENST00000378726 TMC4Q7Z404 712 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 SP8Q8IXZ3 490 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 NKX2-3Q8TAU0 364 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 WDR66Q8TBY9 1149 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 CAMKK2Q96RR4 588 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 VPS37CA5D8V6 355 aaPredicted RBP22.81■■□□□ 1.24
SSU72-204ENST00000378726 B4E1Z4 1266 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 OFD1O75665 1012 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 TPM2P07951 284 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 HS1BP3Q53T59 392 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 CYB5R4Q7L1T6 521 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 LLPHQ9BRT6 129 aaKnown RBP22.81■■□□□ 1.24
SSU72-204ENST00000378726 POLLQ9UGP5 575 aa22.81■■□□□ 1.24
SSU72-204ENST00000378726 PDE6BP35913 854 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 AKNAD1Q5T1N1 836 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 TBC1D16Q8TBP0 767 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.8■■□□□ 1.24
SSU72-204ENST00000378726 PPEF1O14829 653 aaPredicted RBP22.8■■□□□ 1.24
SSU72-204ENST00000378726 NPR1P16066 1061 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 SLC15A2Q16348 729 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 MFSD6Q6ZSS7 791 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 FBXO41Q8TF61 875 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 CD209Q9NNX6 404 aa22.8■■□□□ 1.24
SSU72-204ENST00000378726 CACNA1SQ13698 1873 aa22.79■■□□□ 1.24
SSU72-204ENST00000378726 NEDD4P46934 1319 aa22.79■■□□□ 1.24
SSU72-204ENST00000378726 DDX11Q96FC9 970 aa22.79■■□□□ 1.24
SSU72-204ENST00000378726 NCOA5Q9HCD5 579 aaKnown RBP22.79■■□□□ 1.24
SSU72-204ENST00000378726 ATP6V1DQ9Y5K8 247 aa22.79■■□□□ 1.24
SSU72-204ENST00000378726 SALL1Q9NSC2 1324 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 C6orf229H3BNL8 230 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 SMARCC2Q8TAQ2 1214 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 CHMP4CQ96CF2 233 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
SSU72-204ENST00000378726 ATP6V0A2Q9Y487 856 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 TACC3Q9Y6A5 838 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
SSU72-204ENST00000378726 KLF18A0A0U1RQI7 1052 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 CTDNEP1O95476 244 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 MBD3O95983 291 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 ALDH1B1P30837 517 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 TMED8Q6PL24 325 aaPredicted RBP22.78■■□□□ 1.24
SSU72-204ENST00000378726 NSUN7Q8NE18 718 aaKnown RBP22.78■■□□□ 1.24
SSU72-204ENST00000378726 CNNM2Q9H8M5 875 aa22.78■■□□□ 1.24
SSU72-204ENST00000378726 AATFQ9NY61 560 aaKnown RBP eCLIP22.78■■□□□ 1.24
SSU72-204ENST00000378726 MINDY4BA8MYZ0 360 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
SSU72-204ENST00000378726 DZIP1Q86YF9 867 aaKnown RBP22.77■■□□□ 1.24
SSU72-204ENST00000378726 PKNOX2Q96KN3 472 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 KRT23Q9C075 422 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 ZSWIM5Q9P217 1185 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 PPARAQ07869 468 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 STK11IPQ8N1F8 1099 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 FAM184AQ8NB25 1140 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 STAG1Q8WVM7 1258 aa22.77■■□□□ 1.24
SSU72-204ENST00000378726 ANGEL1Q9UNK9 670 aaKnown RBP22.77■■□□□ 1.24
SSU72-204ENST00000378726 TMEM87BQ96K49 555 aa22.76■■□□□ 1.23
SSU72-204ENST00000378726 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
SSU72-204ENST00000378726 KDM4AO75164 1064 aa22.76■■□□□ 1.23
SSU72-204ENST00000378726 IL1R1P14778 569 aa22.76■■□□□ 1.23
SSU72-204ENST00000378726 TOMM22Q9NS69 142 aa22.76■■□□□ 1.23
SSU72-204ENST00000378726 SH2B2O14492 632 aaPredicted RBP22.75■■□□□ 1.23
SSU72-204ENST00000378726 IGSF3O75054 1194 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 HMGN5P82970 282 aaKnown RBP22.75■■□□□ 1.23
SSU72-204ENST00000378726 RRP12Q5JTH9 1297 aaKnown RBP22.75■■□□□ 1.23
SSU72-204ENST00000378726 CDC37L1Q7L3B6 337 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 IGDCC4Q8TDY8 1250 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 GDPD2Q9HCC8 539 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 MYH13Q9UKX3 1938 aa22.75■■□□□ 1.23
SSU72-204ENST00000378726 PTPDC1A2A3K4 754 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 GIMAP6Q6P9H5 292 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.74■■□□□ 1.23
SSU72-204ENST00000378726 RNF214Q8ND24 703 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 RNF41Q9H4P4 317 aaPredicted RBP22.74■■□□□ 1.23
SSU72-204ENST00000378726 HPS5Q9UPZ3 1129 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 GOLGA8BA8MQT2 603 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 CRNKL1Q9BZJ0 848 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms