RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 UBE2Q2LH0YL09 131 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 GNPATO15228 680 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 SDR42E1Q8WUS8 393 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 WDR19Q8NEZ3 1342 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 SMIM22K7EJ46 135 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 VPS37DQ86XT2 251 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 MINPP1Q9UNW1 487 aa22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.46■■□□□ 1.19
PCDHA4-201ENST00000378125 ZMYM6O95789 1325 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 IFIT3O14879 490 aaKnown RBP22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 KLRK1P26718 216 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 LY9Q9HBG7 655 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 A0A087WWV3 80 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 ALX1Q15699 326 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 SASS6Q6UVJ0 657 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 MFSD6Q6ZSS7 791 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 FAM200AQ8TCP9 573 aa22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 ERCC4Q92889 916 aaPredicted RBP22.45■■□□□ 1.18
PCDHA4-201ENST00000378125 DOCK2Q92608 1830 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 ZBTB43O43298 467 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 SF3B3Q15393 1217 aaKnown RBP22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 AKNAD1Q5T1N1 836 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 DNAJC25Q9H1X3 360 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 PCDHA7Q9UN72 937 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 BCORQ6W2J9 1755 aa22.44■■□□□ 1.18
PCDHA4-201ENST00000378125 MINDY4BA8MYZ0 360 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 FSIP1Q8NA03 581 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 ALG1Q9BT22 464 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 CBX8Q9HC52 389 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 BSDC1Q9NW68 430 aaPredicted RBP22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 LAMB2P55268 1798 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 GOLGA8AA7E2F4 631 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 SPC24Q8NBT2 197 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 TMEM87BQ96K49 555 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 TTC12Q9H892 705 aaPredicted RBP22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 USP21Q9UK80 565 aa22.43■■□□□ 1.18
PCDHA4-201ENST00000378125 CCDC73Q6ZRK6 1079 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 C4AP0C0L4 1744 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 C4BP0C0L5 1744 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 ZPR1O75312 459 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 SNW1Q13573 536 aaKnown RBP22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 STK38Q15208 465 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 SF3A1Q15459 793 aaKnown RBP22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 RBM43Q6ZSC3 357 aaKnown RBP22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 CCNL1Q9UK58 526 aaPredicted RBP22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 COL1A1P02452 1464 aaPredicted RBP22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 CNTNAP4Q9C0A0 1308 aa22.42■■□□□ 1.18
PCDHA4-201ENST00000378125 A0A1B0GVL5 298 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 CCDC69A6NI79 296 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 CCDC82Q8N4S0 544 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 FBXW7Q969H0 707 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 FAM84BQ96KN1 310 aaPredicted RBP22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 SLC12A7Q9Y666 1083 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 CICQ96RK0 1608 aaPredicted RBP22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 KIF23Q02241 960 aaPredicted RBP22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 MYSM1Q5VVJ2 828 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 RTEL1Q9NZ71 1219 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 NARFQ9UHQ1 456 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
PCDHA4-201ENST00000378125 MAGEB6P1A0A0J9YX57 407 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 RANBP6O60518 1105 aaKnown RBP22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 UBE4AQ14139 1066 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 SLC51AQ86UW1 340 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 CMTR1Q8N1G2 835 aaKnown RBP22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 FAM217BQ9NTX9 383 aaPredicted RBP22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 PNPLA7Q6ZV29 1317 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 GNAT2P19087 354 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 ATL3Q6DD88 541 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 LINC00301Q8NCQ3 95 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 ZNF804BA4D1E1 1349 aa22.4■■□□□ 1.18
PCDHA4-201ENST00000378125 CYP2D7A0A087X1C5 515 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 NPHP1O15259 732 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 ZNF500O60304 480 aaPredicted RBP22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 RPS6KA4O75676 772 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 KRT40Q6A162 431 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 SYNE3Q6ZMZ3 975 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 NLRP3Q96P20 1036 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 SLC26A6Q9BXS9 759 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 KRT23Q9C075 422 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 KINO60870 393 aaKnown RBP22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 ZNF165P49910 485 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 PPARAQ07869 468 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 NTRK3Q16288 839 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 CNNM2Q9H8M5 875 aa22.39■■□□□ 1.17
PCDHA4-201ENST00000378125 RPS8P62241 208 aaKnown RBP22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 FAM160A1Q05DH4 1040 aa22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 GNL2Q13823 731 aaKnown RBP22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 CPLX2Q6PUV4 134 aaKnown RBP22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 SGMS1Q86VZ5 419 aa22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 ENGASEQ8NFI3 743 aa22.38■■□□□ 1.17
PCDHA4-201ENST00000378125 ARHGEF1Q92888 912 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms