RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 SH3TC1Q8TE82 1336 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 SNED1Q8TER0 1413 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
UBD-203ENST00000377050 GLIPR1L2Q4G1C9 344 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 ATL3Q6DD88 541 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 COPS6Q7L5N1 327 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
UBD-203ENST00000377050 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
UBD-203ENST00000377050 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
UBD-203ENST00000377050 FAM155AB1AL88 458 aaPredicted RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 PPIP5K2O43314 1243 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 DNM1Q05193 864 aaKnown RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 FBXL16Q8N461 479 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 MYD88Q99836 296 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 BOLA2Q9H3K6 86 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 ZSCAN16Q9H4T2 348 aaPredicted RBP13.07□□□□□ -0.32
UBD-203ENST00000377050 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
UBD-203ENST00000377050 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBD-203ENST00000377050 H7C1W4 665 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 FIBPO43427 364 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 A1BGP04217 495 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
UBD-203ENST00000377050 GMPSP49915 693 aaPredicted RBP13.06□□□□□ -0.32
UBD-203ENST00000377050 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBD-203ENST00000377050 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
UBD-203ENST00000377050 GTF3C6Q969F1 213 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 NEK1Q96PY6 1258 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 GBA2Q9HCG7 927 aaPredicted RBP13.06□□□□□ -0.32
UBD-203ENST00000377050 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
UBD-203ENST00000377050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBD-203ENST00000377050 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 DLL1O00548 723 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 RGL2O15211 777 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 ADCY5O95622 1261 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 CPA1P15085 419 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
UBD-203ENST00000377050 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
UBD-203ENST00000377050 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 SMARCC2Q8TAQ2 1214 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
UBD-203ENST00000377050 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
UBD-203ENST00000377050 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
UBD-203ENST00000377050 CIAO1O76071 339 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
UBD-203ENST00000377050 TNIP1Q15025 636 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
UBD-203ENST00000377050 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 FAM200AQ8TCP9 573 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
UBD-203ENST00000377050 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
UBD-203ENST00000377050 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
UBD-203ENST00000377050 H7C1D1 291 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 PFKFB2O60825 505 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
UBD-203ENST00000377050 CXCL9Q07325 125 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
UBD-203ENST00000377050 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
UBD-203ENST00000377050 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
UBD-203ENST00000377050 SUPT20HQ8NEM7 779 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 CSRNP1Q96S65 589 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 ZNF609O15014 1411 aa13.03□□□□□ -0.32
UBD-203ENST00000377050 MYH15Q9Y2K3 1946 aa13.02□□□□□ -0.32
UBD-203ENST00000377050 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
UBD-203ENST00000377050 GABBR2O75899 941 aa13.02□□□□□ -0.33
UBD-203ENST00000377050 SLC10A3P09131 477 aa13.02□□□□□ -0.33
UBD-203ENST00000377050 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
UBD-203ENST00000377050 TFCP2Q12800 502 aa13.02□□□□□ -0.33
UBD-203ENST00000377050 RESTQ13127 1097 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms