RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 FAM163AQ96GL9 167 aaPredicted RBP20.45■□□□□ 0.86
HLA-F-218ENST00000376861 ECM29Q5VYK3 1845 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 POTEIP0CG38 1075 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 PDE6AP16499 860 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 PLCG2P16885 1265 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 TNFAIP1Q13829 316 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 APOBEC3FQ8IUX4 373 aaKnown RBP20.44■□□□□ 0.86
HLA-F-218ENST00000376861 USP40Q9NVE5 1235 aa20.44■□□□□ 0.86
HLA-F-218ENST00000376861 GAKO14976 1311 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 TNNI2P48788 182 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 APOBEC3HQ6NTF7 200 aaKnown RBP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 CERS3Q8IU89 383 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 AATFQ9NY61 560 aaKnown RBP eCLIP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 ZNF70Q9UC06 446 aaPredicted RBP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 PITPNM2Q9BZ72 1349 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 SDSP20132 328 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 CDC37L1Q7L3B6 337 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 KRT26Q7Z3Y9 468 aa20.43■□□□□ 0.86
HLA-F-218ENST00000376861 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 ZBED3Q96IU2 234 aaPredicted RBP20.43■□□□□ 0.86
HLA-F-218ENST00000376861 GPR75-ASB3A0A0A6YYF3 556 aa20.42■□□□□ 0.86
HLA-F-218ENST00000376861 ADD2P35612 726 aa20.42■□□□□ 0.86
HLA-F-218ENST00000376861 UBE3CQ15386 1083 aa20.42■□□□□ 0.86
HLA-F-218ENST00000376861 SPDYE2Q495Y8 402 aa20.42■□□□□ 0.86
HLA-F-218ENST00000376861 MIGA1Q8NAN2 632 aa20.42■□□□□ 0.86
HLA-F-218ENST00000376861 ASTN2O75129 1339 aaPredicted RBP20.41■□□□□ 0.86
HLA-F-218ENST00000376861 MAGEB6P1A0A0J9YX57 407 aa20.41■□□□□ 0.86
HLA-F-218ENST00000376861 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
HLA-F-218ENST00000376861 RNF113AO15541 343 aaKnown RBP20.41■□□□□ 0.86
HLA-F-218ENST00000376861 CDC42EP5Q6NZY7 148 aa20.41■□□□□ 0.86
HLA-F-218ENST00000376861 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
HLA-F-218ENST00000376861 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
HLA-F-218ENST00000376861 C8orf34Q49A92 452 aa20.4■□□□□ 0.86
HLA-F-218ENST00000376861 AIDAQ96BJ3 306 aa20.4■□□□□ 0.86
HLA-F-218ENST00000376861 HIP1O00291 1037 aa20.39■□□□□ 0.85
HLA-F-218ENST00000376861 CDC45O75419 566 aa20.39■□□□□ 0.85
HLA-F-218ENST00000376861 FSTL1Q12841 308 aa20.39■□□□□ 0.85
HLA-F-218ENST00000376861 USP48Q86UV5 1035 aa20.39■□□□□ 0.85
HLA-F-218ENST00000376861 TEX11Q8IYF3 940 aa20.39■□□□□ 0.85
HLA-F-218ENST00000376861 POLR2AP24928 1970 aaKnown RBP20.39■□□□□ 0.85
HLA-F-218ENST00000376861 USP5P45974 858 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 CACNB3P54284 484 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 ADGRA1Q86SQ6 560 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 APPBP2Q92624 585 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 BACH2Q9BYV9 841 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
HLA-F-218ENST00000376861 PPP4CP60510 307 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 PICALMQ13492 652 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 GLIS2Q9BZE0 524 aaPredicted RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 DEFB129Q9H1M3 183 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 SCAF8Q9UPN6 1271 aaKnown RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 TCRBV5S4A2TA0A5A2 114 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 NF2P35240 595 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 DYNLL1P63167 89 aaKnown RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 TCP10Q12799 353 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 ZSCAN29Q8IWY8 852 aaPredicted RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 SH3RF3Q8TEJ3 882 aaPredicted RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
HLA-F-218ENST00000376861 CRNKL1Q9BZJ0 848 aaKnown RBP20.37■□□□□ 0.85
HLA-F-218ENST00000376861 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
HLA-F-218ENST00000376861 MBD4O95243 580 aa20.36■□□□□ 0.85
HLA-F-218ENST00000376861 RASA3Q14644 834 aa20.36■□□□□ 0.85
HLA-F-218ENST00000376861 FKBP1CQ5VVH2 108 aa20.36■□□□□ 0.85
HLA-F-218ENST00000376861 PPP2R3BQ9Y5P8 575 aa20.36■□□□□ 0.85
HLA-F-218ENST00000376861 RFX7Q2KHR2 1363 aa20.35■□□□□ 0.85
HLA-F-218ENST00000376861 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
HLA-F-218ENST00000376861 SLFNL1Q499Z3 407 aa20.35■□□□□ 0.85
HLA-F-218ENST00000376861 FAM83AQ86UY5 434 aa20.35■□□□□ 0.85
HLA-F-218ENST00000376861 TGFBRAP1Q8WUH2 860 aa20.35■□□□□ 0.85
HLA-F-218ENST00000376861 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
HLA-F-218ENST00000376861 RHBDL3P58872 404 aa20.34■□□□□ 0.85
HLA-F-218ENST00000376861 PUS7LQ9H0K6 701 aaKnown RBP20.34■□□□□ 0.85
HLA-F-218ENST00000376861 ARMT1Q9H993 441 aa20.34■□□□□ 0.85
HLA-F-218ENST00000376861 CHGBP05060 677 aa20.33■□□□□ 0.85
HLA-F-218ENST00000376861 SUPT20HL1Q3ZLR7 823 aa20.33■□□□□ 0.85
HLA-F-218ENST00000376861 HOOK2Q96ED9 719 aa20.33■□□□□ 0.85
HLA-F-218ENST00000376861 IDI2Q9BXS1 227 aa20.33■□□□□ 0.85
HLA-F-218ENST00000376861 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
HLA-F-218ENST00000376861 ENTPD3O75355 529 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
HLA-F-218ENST00000376861 NFIAQ12857 509 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 ZMYM1Q5SVZ6 1142 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 AMOTL1Q8IY63 956 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 FAM151AQ8WW52 585 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 RIOK1Q9BRS2 568 aaKnown RBP20.32■□□□□ 0.84
HLA-F-218ENST00000376861 TRAF5O00463 557 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 WDHD1O75717 1129 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-218ENST00000376861 APPP05067 770 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 GNAT2P19087 354 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 MCMDC2Q4G0Z9 681 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 PRAMEF18Q5VWM3 479 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms