RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 DIS3L2Q8IYB7 885 aaKnown RBP12.83□□□□□ -0.36
HDAC6-203ENST00000376619 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-203ENST00000376619 IDEP14735 1019 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 STX1AQ16623 288 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 CCDC96Q2M329 555 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-203ENST00000376619 RGS12O14924 1447 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 CDC25AP30304 524 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 ERFEQ4G0M1 354 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 MAPKAPK5Q8IW41 473 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
HDAC6-203ENST00000376619 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 UBE2Q2LH0YL09 131 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 APBA3O96018 575 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 FOXO4P98177 505 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■□□□ 12.3
HDAC6-203ENST00000376619 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-203ENST00000376619 RNF41Q9H4P4 317 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-203ENST00000376619 CCDC196A0A1B0GTZ2 297 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 URI1O94763 535 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-203ENST00000376619 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-203ENST00000376619 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 IFNL3Q8IZI9 196 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 TANGO6Q9C0B7 1094 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
HDAC6-203ENST00000376619 CCDC194A0A1B0GVG4 234 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 NSUN7Q8NE18 718 aaKnown RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 TTC14Q96N46 770 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 POLR2DO15514 142 aaKnown RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 ANKRD20A12PQ8NF67 263 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 PXDNQ92626 1479 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 NR5A1Q13285 461 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 MTX1Q13505 466 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
HDAC6-203ENST00000376619 TXLNAP40222 546 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 CPVLQ9H3G5 476 aa12.81□□□□□ -0.36
HDAC6-203ENST00000376619 HIBADHP31937 336 aaKnown RBP12.8□□□□□ -0.36
HDAC6-203ENST00000376619 NDUFA8P51970 172 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 UBASH3AP57075 661 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
HDAC6-203ENST00000376619 TCP10Q12799 353 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 ARID5BQ14865 1188 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
HDAC6-203ENST00000376619 PNOCQ13519 176 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 GRAMD1CQ8IYS0 662 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 PCDHA7Q9UN72 937 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 DLC1Q96QB1 1528 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 ZNF202O95125 648 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 PPFIBP1Q86W92 1011 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
HDAC6-203ENST00000376619 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-203ENST00000376619 UFL1O94874 794 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 CHD2O14647 1828 aaKnown RBP12.79□□□□□ -0.36
HDAC6-203ENST00000376619 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 WASF1Q92558 559 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 KRT23Q9C075 422 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
HDAC6-203ENST00000376619 PDE4BQ07343 736 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 ZNF771Q7L3S4 317 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-203ENST00000376619 KCNG4Q8TDN1 519 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
HDAC6-203ENST00000376619 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 FAM160A1Q05DH4 1040 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 PYCARDQ9ULZ3 195 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
HDAC6-203ENST00000376619 TPM2P07951 284 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
HDAC6-203ENST00000376619 UBA5Q9GZZ9 404 aa12.78□□□□□ -0.36
HDAC6-203ENST00000376619 NMT2O60551 498 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 CASP1P29466 404 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 UBA7P41226 1012 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 AKNAD1Q5T1N1 836 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms