RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FAM196AQ6ZSG2 479 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-203ENST00000375315 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
C9orf3-203ENST00000375315 URI1O94763 535 aaPredicted RBP14□□□□□ -0.17
C9orf3-203ENST00000375315 TSGA10IPQ3SY00 556 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 CARD6Q9BX69 1037 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 DONSONQ9NYP3 566 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 STAP2Q9UGK3 403 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 MKRN1Q9UHC7 482 aaKnown RBP14□□□□□ -0.17
C9orf3-203ENST00000375315 DBNLQ9UJU6 430 aaKnown RBP14□□□□□ -0.17
C9orf3-203ENST00000375315 DOT1LQ8TEK3 1739 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 SRCAPQ6ZRS2 3230 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 TAF5LO75529 589 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 RPS6KA5O75582 802 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 SFPQP23246 707 aaKnown RBP eCLIP14□□□□□ -0.17
C9orf3-203ENST00000375315 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 LEO1Q8WVC0 666 aaPredicted RBP14□□□□□ -0.17
C9orf3-203ENST00000375315 GPATCH3Q96I76 525 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 FSD1Q9BTV5 496 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
C9orf3-203ENST00000375315 CTAGE5O15320 804 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
C9orf3-203ENST00000375315 FKBP4Q02790 459 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■■□□□ 13.3
C9orf3-203ENST00000375315 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
C9orf3-203ENST00000375315 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 MMS22LQ6ZRQ5 1243 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 C11orf57Q6ZUT1 292 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-203ENST00000375315 PDRG1Q9NUG6 133 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 CORO7P57737 925 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 AOX1Q06278 1338 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 ZPR1O75312 459 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 GNL2Q13823 731 aaKnown RBP13.99□□□□□ -0.17
C9orf3-203ENST00000375315 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 CDC37L1Q7L3B6 337 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 COPRSQ9NQ92 184 aa13.99□□□□□ -0.17
C9orf3-203ENST00000375315 TFIP11Q9UBB9 837 aaKnown RBP13.99□□□□□ -0.17
C9orf3-203ENST00000375315 GLRX3O76003 335 aaKnown RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 PCCAP05165 728 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 ADORA1P30542 326 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 E2F4Q16254 413 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 CEP89Q96ST8 783 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 SGSM2O43147 1006 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 GSCP56915 257 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 PI16Q6UXB8 463 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 UTP14AQ9BVJ6 771 aaKnown RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 ANO10Q9NW15 660 aa13.98□□□□□ -0.17
C9orf3-203ENST00000375315 RTCBQ9Y3I0 505 aaKnown RBP13.98□□□□□ -0.17
C9orf3-203ENST00000375315 EYA2O00167 538 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-203ENST00000375315 TBC1D9BQ66K14 1250 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 COL15A1P39059 1388 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 EFCAB13Q8IY85 973 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 NAT10Q9H0A0 1025 aaKnown RBP13.97□□□□□ -0.17
C9orf3-203ENST00000375315 VPS18Q9P253 973 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 GOLIM4O00461 696 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 CPP00450 1065 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 RFC4P35249 363 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
C9orf3-203ENST00000375315 GLI3P10071 1580 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-203ENST00000375315 MAP2K2P36507 400 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 CTSWP56202 376 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
C9orf3-203ENST00000375315 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
C9orf3-203ENST00000375315 ZSCAN16Q9H4T2 348 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-203ENST00000375315 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 NRAPQ86VF7 1730 aa13.96□□□□□ -0.17
C9orf3-203ENST00000375315 CPA1P15085 419 aa13.96□□□□□ -0.18
C9orf3-203ENST00000375315 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.18
C9orf3-203ENST00000375315 H3BQF6 201 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 DHX40Q8IX18 779 aaKnown RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 MPHOSPH8Q99549 860 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 TMC6Q7Z403 805 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 SLC51AQ86UW1 340 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms