RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 IGSF22Q8N9C0 903 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 RETREG2Q8NC44 543 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 TMOD2Q9NZR1 351 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 LEO1Q8WVC0 666 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 PLCG2P16885 1265 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 ZNF622Q969S3 477 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 GUCA1BQ9UMX6 200 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 NPATQ14207 1427 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 AP1ARQ63HQ0 302 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 TESK2Q96S53 571 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 IKBKBO14920 756 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 SNX16P57768 344 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 ZBTB16Q05516 673 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 CCDC62Q6P9F0 684 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 MCM10Q7L590 875 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 SAR1BQ9Y6B6 198 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 HS2ST1Q7LGA3 356 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 C6orf50Q9HD87 102 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 SGSM2O43147 1006 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 OAS2P29728 719 aaKnown RBP11.42□□□□□ -0.58
PTCH1-204ENST00000375290 AFAP1L2Q8N4X5 818 aa11.42□□□□□ -0.58
PTCH1-204ENST00000375290 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 VAMP4O75379 141 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 MYL6BP14649 208 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 VTI1AQ96AJ9 217 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SYNRGQ9UMZ2 1314 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 A0A087WUV0 522 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 A0A1W2PQ27 194 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 A0A1W2PQ64 194 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 A0A1W2PQD8 194 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 ZEB2O60315 1214 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 MICU3Q86XE3 530 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 PRPF4BQ13523 1007 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 IFIT1BQ5T764 474 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 LRRC8AQ8IWT6 810 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 ACTR5Q9H9F9 607 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 CLNS1AP54105 237 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 CFAP157Q5JU67 520 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 CNOT10Q9H9A5 744 aaKnown RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 PCK1P35558 622 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 PPP1R2P3Q6NXS1 205 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 PAG1Q9NWQ8 432 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 PLB1Q6P1J6 1458 aa11.41□□□□□ -0.58
PTCH1-204ENST00000375290 CASQ2O14958 399 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-204ENST00000375290 MAN1A1P33908 653 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 RNF40O75150 1001 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 ANKLE2Q86XL3 938 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 KRT79Q5XKE5 535 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 VCX3AQ9NNX9 186 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 ZRANB1Q9UGI0 708 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 ELF2Q15723 593 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 TMEM87AQ8NBN3 555 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 DENND4BO75064 1496 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 SYCP2Q9BX26 1530 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 CCDC169A6NNP5 214 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 HIP1RO75146 1068 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
PTCH1-204ENST00000375290 ST5P78524 1137 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 MXRA7P84157 204 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 KCNH3Q9ULD8 1083 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
PTCH1-204ENST00000375290 PZPP20742 1482 aa11.4□□□□□ -0.59
PTCH1-204ENST00000375290 TCERG1LQ5VWI1 586 aa11.4□□□□□ -0.59
PTCH1-204ENST00000375290 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.59
PTCH1-204ENST00000375290 RAB11FIP4Q86YS3 637 aa11.4□□□□□ -0.59
PTCH1-204ENST00000375290 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 NUTM2BA6NNL0 878 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 NUTM2EB1AL46 878 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-204ENST00000375290 KCNJ6P48051 423 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 FANCCQ00597 558 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
PTCH1-204ENST00000375290 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms