RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 SBNO1A3KN83 1393 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 ATP7BP35670 1465 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 NPHP3Q7Z494 1330 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 UNCXA6NJT0 531 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 HOXD8P13378 290 aaPredicted RBP3.16□□□□□ -1.9
CCDC7-204ENST00000375025 IGF2-ASQ6U949 168 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 TMEM130Q8N3G9 435 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 GAS2L2Q8NHY3 880 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 MEGF10Q96KG7 1140 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 TRPM1Q7Z4N2 1603 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 CASKIN1Q8WXD9 1431 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 ERBINQ96RT1 1412 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 SPATA31A5Q5VU36 1347 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 SPATA31A7Q8IWB4 1347 aa3.16□□□□□ -1.9
CCDC7-204ENST00000375025 TNRC6CQ9HCJ0 1690 aaKnown RBP3.16□□□□□ -1.9
CCDC7-204ENST00000375025 CRYBG1Q9Y4K1 1723 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 DLL1O00548 723 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 YBX3P16989 372 aaKnown RBP eCLIP3.15□□□□□ -1.9
CCDC7-204ENST00000375025 GRNP28799 593 aaKnown RBP3.15□□□□□ -1.9
CCDC7-204ENST00000375025 SEMA3FQ13275 785 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 SF3A1Q15459 793 aaKnown RBP3.15□□□□□ -1.9
CCDC7-204ENST00000375025 PCSK7Q16549 785 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 ZNF280CQ8ND82 737 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 UBXN4Q92575 508 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 LPIN3Q9BQK8 851 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 PHACTR1Q9C0D0 580 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 DNAJB12Q9NXW2 375 aaKnown RBP3.15□□□□□ -1.9
CCDC7-204ENST00000375025 RIMS2Q9UQ26 1411 aa3.15□□□□□ -1.9
CCDC7-204ENST00000375025 HMGB1P1B2RPK0 211 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-204ENST00000375025 BTLAQ7Z6A9 289 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 SIX5Q8N196 739 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 TRPM4Q8TD43 1214 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 PBXIP1Q96AQ6 731 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 HSH2DQ96JZ2 352 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 CEP63Q96MT8 703 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 SRA1Q9HD15 236 aaKnown RBP3.15□□□□□ -1.91
CCDC7-204ENST00000375025 NEUROD4Q9HD90 331 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 JPH1Q9HDC5 661 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-204ENST00000375025 CCDC144AA2RUR9 1427 aa3.15□□□□□ -1.91
CCDC7-204ENST00000375025 C21orf2O43822 256 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 FSTP19883 344 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 B4GALNT3Q6L9W6 998 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 PSAPL1Q6NUJ1 521 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 TRIM50Q86XT4 487 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 ABHD8Q96I13 439 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 UBE2OQ9C0C9 1292 aaKnown RBP3.14□□□□□ -1.91
CCDC7-204ENST00000375025 IVNS1ABPQ9Y6Y0 642 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 EEA1Q15075 1411 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 VIRMAQ69YN4 1812 aaKnown RBP3.14□□□□□ -1.91
CCDC7-204ENST00000375025 SRCAPQ6ZRS2 3230 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 KIF3BO15066 747 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 SMARCA5O60264 1052 aaPredicted RBP3.14□□□□□ -1.91
CCDC7-204ENST00000375025 NOL8Q76FK4 1167 aaKnown RBP3.14□□□□□ -1.91
CCDC7-204ENST00000375025 RAB44Q7Z6P3 723 aaPredicted RBP3.14□□□□□ -1.91
CCDC7-204ENST00000375025 EXOC8Q8IYI6 725 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 BHMTQ93088 406 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 SPATA31A3Q5VYP0 1347 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 SBF2Q86WG5 1849 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 PLEKHG2Q9H7P9 1386 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 EP400Q96L91 3159 aa3.14□□□□□ -1.91
CCDC7-204ENST00000375025 ANKRD62A6NC57 917 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 SFI1A8K8P3 1242 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 DEAF1O75398 565 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 SPINK2P20155 84 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 CTCFP49711 727 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 NCOA4Q13772 614 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 CCINQ13939 588 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 DMRTC2Q8IXT2 367 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 C2orf49Q9BVC5 232 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 HIRIP3Q9BW71 556 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 TSPAN10Q9H1Z9 355 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 KIAA1024Q9UPX6 916 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 GNEQ9Y223 722 aaKnown RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 QRICH2Q9H0J4 1663 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 TOPAZ1Q8N9V7 1692 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 USP17L5A8MUK1 530 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 TGFBR3LH3BV60 316 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 SKIP12755 728 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 GPLD1P80108 840 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 CCDC181Q5TID7 509 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 LARGE2Q8N3Y3 721 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 GDPD2Q9HCC8 539 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 ZNF232Q9UNY5 417 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 COG6Q9Y2V7 657 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 ARHGEF10O15013 1369 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 TNS3Q68CZ2 1445 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 MEGF6O75095 1541 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 ZBTB42B2RXF5 422 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 RGS9O75916 674 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 VAMP1P23763 118 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 IREB2P48200 963 aaKnown RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 MRRFQ96E11 262 aaKnown RBP3.13□□□□□ -1.91
CCDC7-204ENST00000375025 POM121Q96HA1 1249 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 RIPOR2Q9Y4F9 1068 aa3.13□□□□□ -1.91
CCDC7-204ENST00000375025 F8W735 103 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-204ENST00000375025 GSC2O15499 205 aa3.12□□□□□ -1.91
CCDC7-204ENST00000375025 EGFRP00533 1210 aa3.12□□□□□ -1.91
CCDC7-204ENST00000375025 ATP1A2P50993 1020 aa3.12□□□□□ -1.91
CCDC7-204ENST00000375025 ZC3H6P61129 1189 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms