RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
PTPN20-204ENST00000374346 ZSCAN20P17040 1043 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-204ENST00000374346 EVA1CP58658 441 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
PTPN20-204ENST00000374346 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 WASF1Q92558 559 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 SLU7O95391 586 aaKnown RBP13.18□□□□□ -0.3
PTPN20-204ENST00000374346 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
PTPN20-204ENST00000374346 KRT40Q6A162 431 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 PI16Q6UXB8 463 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
PTPN20-204ENST00000374346 RIC1Q4ADV7 1423 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-204ENST00000374346 CTSWP56202 376 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 APOA5Q6Q788 366 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 MYL5Q02045 173 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-204ENST00000374346 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
PTPN20-204ENST00000374346 TUBE1Q9UJT0 475 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 NEDD4P46934 1319 aa13.17□□□□□ -0.3
PTPN20-204ENST00000374346 CUTAO60888 179 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-204ENST00000374346 PDE8BO95263 885 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 SERPINC1P01008 464 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 FANCCQ00597 558 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN20-204ENST00000374346 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-204ENST00000374346 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 ZNF532Q9HCE3 1301 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 GOLGA8AA7E2F4 631 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-204ENST00000374346 NCAPHQ15003 741 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 GREM2Q9H772 168 aa13.16□□□□□ -0.3
PTPN20-204ENST00000374346 FAM237AA0A1B0GTK4 181 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 B4E1Z4 1266 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 PDE6AP16499 860 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 LIFRP42702 1097 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 UBASH3AP57075 661 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 MROH7-TTC4A0A0A0MT08 1334 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 CHD4Q14839 1912 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 PUM3Q15397 648 aaKnown RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 ALX1Q15699 326 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 KRT23Q9C075 422 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 NAPBQ9H115 298 aa13.15□□□□□ -0.3
PTPN20-204ENST00000374346 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
PTPN20-204ENST00000374346 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
PTPN20-204ENST00000374346 PDE8AO60658 829 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 PTPAQ15257 358 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 LPIN2Q92539 896 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 PHKBQ93100 1093 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
PTPN20-204ENST00000374346 MROH5Q6ZUA9 1318 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 KIF20AO95235 890 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 GPTP24298 496 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
PTPN20-204ENST00000374346 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
PTPN20-204ENST00000374346 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
PTPN20-204ENST00000374346 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms