RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 USP17L21D6R901 530 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 CIAO1O76071 339 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF202O95125 648 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 CLEC17AQ6ZS10 378 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ZHX3Q9H4I2 956 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 MRVI1Q9Y6F6 885 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 TSR1Q2NL82 804 aaKnown RBP13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 CRNKL1Q9BZJ0 848 aaKnown RBP13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 ADD2P35612 726 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 NRXN3Q9Y4C0 1643 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 PDE4CQ08493 712 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 RESTQ13127 1097 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 PYCARDQ9ULZ3 195 aa13.59□□□□□ -0.23
PACSIN1-202ENST00000374043 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 TXLNAP40222 546 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 CBX1P83916 185 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 PARP10Q53GL7 1025 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 C11orf57Q6ZUT1 292 aaPredicted RBP13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 GPR108Q9NPR9 543 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 PEAK1Q9H792 1746 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 UBASH3AP57075 661 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
PACSIN1-202ENST00000374043 SLIT1O75093 1534 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 HIBADHP31937 336 aaKnown RBP13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 MCM7P33993 719 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 PNOCQ13519 176 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 APOA5Q6Q788 366 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 HEATR3Q7Z4Q2 680 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 POLR2DO15514 142 aaKnown RBP13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 PDE4BQ07343 736 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 ST3GAL1Q11201 340 aa13.57□□□□□ -0.24
PACSIN1-202ENST00000374043 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 ZNF75DP51815 510 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 CYB5R4Q7L1T6 521 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 TRMT44Q8IYL2 757 aaKnown RBP13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 COBLO75128 1261 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 TSPY3P0CV98 308 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 TSPY8P0CW00 308 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 HS1BP3Q53T59 392 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 PPFIBP1Q86W92 1011 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 UTYO14607 1347 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 PFKFB1P16118 471 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 NR5A1Q13285 461 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 TMEM87BQ96K49 555 aa13.56□□□□□ -0.24
PACSIN1-202ENST00000374043 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 PPARAQ07869 468 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 ARID5BQ14865 1188 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 URI1O94763 535 aaPredicted RBP13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 TRMT1LQ7Z2T5 733 aaKnown RBP13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 MAPKAPK5Q8IW41 473 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 ZNF654Q8IZM8 581 aa13.55□□□□□ -0.24
PACSIN1-202ENST00000374043 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 RGPD8O14715 1765 aaPredicted RBP13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 C3P01024 1663 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 TNKSO95271 1327 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
PACSIN1-202ENST00000374043 PIK3AP1Q6ZUJ8 805 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms