RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 STMN4Q9H169 189 aaPredicted RBP16.14■□□□□ 0.17
TRAF1-201ENST00000373887 PDE8AO60658 829 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.17
TRAF1-201ENST00000373887 QTRT2Q9H974 415 aaKnown RBP16.14■□□□□ 0.17
TRAF1-201ENST00000373887 RHOXF2BP0C7M4 288 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 GNAQP50148 359 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 UVSSAQ2YD98 709 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 CCDC114Q96M63 670 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
TRAF1-201ENST00000373887 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
TRAF1-201ENST00000373887 CFAP157Q5JU67 520 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 XAGE2Q96GT9 111 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 SYT1P21579 422 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 HDAC1Q13547 482 aaPredicted RBP16.13■□□□□ 0.17
TRAF1-201ENST00000373887 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 TESK2Q96S53 571 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 ATP2A1O14983 1001 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 FAM13AO94988 1023 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 HARSP12081 509 aaKnown RBP16.13■□□□□ 0.17
TRAF1-201ENST00000373887 NUP160Q12769 1436 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
TRAF1-201ENST00000373887 NOLC1Q14978 699 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAF1-201ENST00000373887 CPLX4Q7Z7G2 160 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 CPA1P15085 419 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
TRAF1-201ENST00000373887 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 TXNDC16Q9P2K2 825 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
TRAF1-201ENST00000373887 KRT2P35908 639 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 UAP1Q16222 522 aaPredicted RBP16.12■□□□□ 0.17
TRAF1-201ENST00000373887 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 TTC14Q96N46 770 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 B4E1Z4 1266 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 IL13P35225 146 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 KCNQ4P56696 695 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 GOLGA1Q92805 767 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 COL17A1Q9UMD9 1497 aaPredicted RBP16.12■□□□□ 0.17
TRAF1-201ENST00000373887 PPP1R9BQ96SB3 815 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 GINS2Q9Y248 185 aa16.12■□□□□ 0.17
TRAF1-201ENST00000373887 PPP1R7Q15435 360 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 LZTFL1Q9NQ48 299 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 TRIM37O94972 964 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 TTC31Q49AM3 519 aaPredicted RBP16.11■□□□□ 0.17
TRAF1-201ENST00000373887 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 FAM169AQ9Y6X4 670 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
TRAF1-201ENST00000373887 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 ZMYND15Q9H091 742 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 DBNDD2Q9BQY9 259 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
TRAF1-201ENST00000373887 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
TRAF1-201ENST00000373887 PRPHP41219 470 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 SNX16P57768 344 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 USP37Q86T82 979 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 UBLCP1Q8WVY7 318 aaPredicted RBP16.1■□□□□ 0.17
TRAF1-201ENST00000373887 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 MRRFQ96E11 262 aaKnown RBP16.1■□□□□ 0.17
TRAF1-201ENST00000373887 IMPG2Q9BZV3 1241 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 TTC36A6NLP5 189 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 IGSF3O75054 1194 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 STX17P56962 302 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 SEPT14Q6ZU15 432 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
TRAF1-201ENST00000373887 POLR3AO14802 1390 aaPredicted RBP16.1■□□□□ 0.17
TRAF1-201ENST00000373887 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 USH1GQ495M9 461 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 NOD1Q9Y239 953 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 EYA2O00167 538 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 UBXN1Q04323 297 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 MAPKAPK5Q8IW41 473 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 BEGAINQ9BUH8 593 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 PFDN4Q9NQP4 134 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 USP19O94966 1318 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
TRAF1-201ENST00000373887 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 RASA3Q14644 834 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 CCDC65Q8IXS2 484 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 TRIM7Q9C029 511 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 DTNBO60941 627 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 ERCC5P28715 1186 aaPredicted RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 ZNF569Q5MCW4 686 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 PROCA1Q8NCQ7 364 aaPredicted RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 NCBP1Q09161 790 aaKnown RBP16.09■□□□□ 0.17
TRAF1-201ENST00000373887 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
TRAF1-201ENST00000373887 IRX5P78411 483 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms