RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.6□□□□□ -0.87
SP140-202ENST00000373645 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 OPTNQ96CV9 577 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 ZNF594Q96JF6 807 aaPredicted RBP9.6□□□□□ -0.87
SP140-202ENST00000373645 MPHOSPH8Q99549 860 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 MEIS3Q99687 375 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 ANKRD2Q9GZV1 360 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 UTYO14607 1347 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
SP140-202ENST00000373645 GRM8O00222 908 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
SP140-202ENST00000373645 IL1R1P14778 569 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
SP140-202ENST00000373645 RBM5P52756 815 aaKnown RBP eCLIP9.59□□□□□ -0.87
SP140-202ENST00000373645 INHBEP58166 350 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 FOXO4P98177 505 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 GRIK5Q16478 980 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 EPHA10Q5JZY3 1008 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 FAM43AQ8N2R8 423 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 TEPSINQ96N21 525 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 TMEM39BQ9GZU3 492 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 PPP2R3BQ9Y5P8 575 aa9.59□□□□□ -0.87
SP140-202ENST00000373645 H0YGN5 161 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 GNAI2P04899 355 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 VGLL4Q14135 290 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 TAF1CQ15572 869 aaPredicted RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 C15orf52Q6ZUT6 534 aaKnown RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 ANKRD13AQ8IZ07 590 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 SH3TC2Q8TF17 1288 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 TDRD3Q9H7E2 651 aaKnown RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 ZNF70Q9UC06 446 aaPredicted RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 ARAP2Q8WZ64 1704 aa9.58□□□□□ -0.88
SP140-202ENST00000373645 RANBP2P49792 3224 aaKnown RBP9.58□□□□□ -0.88
SP140-202ENST00000373645 CCL15-CCL14A0A0B4J2E2 113 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 ANKRD18BA2A2Z9 1011 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 TCP10L2B9ZVM9 353 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 MYO1BO43795 1136 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 GYG1P46976 350 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 MMP14P50281 582 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 CACNB3P54284 484 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 CCL15Q16663 113 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 SLC9C1Q4G0N8 1177 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 MFSD14BQ5SR56 506 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 ZNF804AQ7Z570 1209 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 RPAP2Q8IXW5 612 aaPredicted RBP9.57□□□□□ -0.88
SP140-202ENST00000373645 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
SP140-202ENST00000373645 CTGFP29279 349 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 ATP8B2P98198 1209 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 SLC4A8Q2Y0W8 1093 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.56□□□□□ -0.88
SP140-202ENST00000373645 SUCLG2Q96I99 432 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
SP140-202ENST00000373645 TTF2Q9UNY4 1162 aaKnown RBP9.56□□□□□ -0.88
SP140-202ENST00000373645 IQSEC3Q9UPP2 1182 aaPredicted RBP9.56□□□□□ -0.88
SP140-202ENST00000373645 SNCAIPQ9Y6H5 919 aa9.56□□□□□ -0.88
SP140-202ENST00000373645 FKBP1AP62942 108 aaKnown RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 IFIT5Q13325 482 aaKnown RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 MTFR1Q15390 333 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 OTUD7BQ6GQQ9 843 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 LMBR1LQ6UX01 489 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 ANKRD44Q8N8A2 993 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 TDRD7Q8NHU6 1098 aaKnown RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 CCDC136Q96JN2 1154 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 PUS3Q9BZE2 481 aaKnown RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 RWDD1Q9H446 243 aaPredicted RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 LRRFIP2Q9Y608 721 aaKnown RBP9.55□□□□□ -0.88
SP140-202ENST00000373645 FAM205AQ6ZU69 1335 aa9.55□□□□□ -0.88
SP140-202ENST00000373645 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 BTBD19C9JJ37 291 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 CRKP46108 304 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 LACTBP83111 547 aaPredicted RBP9.54□□□□□ -0.88
SP140-202ENST00000373645 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
SP140-202ENST00000373645 CEP85Q6P2H3 762 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
SP140-202ENST00000373645 KAZALD1Q96I82 304 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 ZFYVE28Q9HCC9 887 aa9.54□□□□□ -0.88
SP140-202ENST00000373645 SPDYE5A6NIY4 337 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 IRF6O14896 467 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 HMMRO75330 724 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 IGHDP01880 384 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 GTF2A2P52657 109 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 MTX1Q13505 466 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 TNFAIP1Q13829 316 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
SP140-202ENST00000373645 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 LDHAL6AQ6ZMR3 332 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 SIRT2Q8IXJ6 389 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 FAM84BQ96KN1 310 aaPredicted RBP9.53□□□□□ -0.88
SP140-202ENST00000373645 BICC1Q9H694 974 aaKnown RBP9.53□□□□□ -0.88
SP140-202ENST00000373645 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms