RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
HDAC8-205ENST00000373568 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
HDAC8-205ENST00000373568 RPAP1Q9BWH6 1393 aaPredicted RBP16.06■□□□□ 0.16
HDAC8-205ENST00000373568 RHBDL3P58872 404 aa16.06■□□□□ 0.16
HDAC8-205ENST00000373568 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
HDAC8-205ENST00000373568 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
HDAC8-205ENST00000373568 HAUS7Q99871 368 aa16.06■□□□□ 0.16
HDAC8-205ENST00000373568 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
HDAC8-205ENST00000373568 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
HDAC8-205ENST00000373568 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 BTDP43251 543 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 GSTO1P78417 241 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 NFIAQ12857 509 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 FAM83AQ86UY5 434 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
HDAC8-205ENST00000373568 WDHD1O75717 1129 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 HHIPL1Q96JK4 782 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 DNAJC2Q99543 621 aaKnown RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
HDAC8-205ENST00000373568 MKRN1Q9UHC7 482 aaKnown RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 ABT1Q9ULW3 272 aaKnown RBP16.04■□□□□ 0.16
HDAC8-205ENST00000373568 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 GOLIM4O00461 696 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 IDH1O75874 414 aaKnown RBP16.03■□□□□ 0.16
HDAC8-205ENST00000373568 LDHCP07864 332 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 FKBP1BP68106 108 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
HDAC8-205ENST00000373568 MOB2Q70IA6 237 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
HDAC8-205ENST00000373568 TNNI2P48788 182 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 PPP4CP60510 307 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 DEFB115Q30KQ5 88 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 MAGEB6Q8N7X4 407 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
HDAC8-205ENST00000373568 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 SIPA1L1O43166 1804 aa16.02■□□□□ 0.16
HDAC8-205ENST00000373568 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
HDAC8-205ENST00000373568 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 LAMB1P07942 1786 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
HDAC8-205ENST00000373568 MX1P20591 662 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 RGS3P49796 1198 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 HUNKP57058 714 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 NUCB1Q02818 461 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
HDAC8-205ENST00000373568 ZFPM1Q8IX07 1006 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
HDAC8-205ENST00000373568 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
HDAC8-205ENST00000373568 ENTPD3O75355 529 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
HDAC8-205ENST00000373568 PDE6AP16499 860 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 CYP7A1P22680 504 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 NF2P35240 595 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 VEGFBP49765 207 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 SH3BP5LQ7L8J4 393 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
HDAC8-205ENST00000373568 GPATCH3Q96I76 525 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 LNPKQ9C0E8 428 aa16■□□□□ 0.15
HDAC8-205ENST00000373568 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC8-205ENST00000373568 CHGBP05060 677 aa15.99■□□□□ 0.15
HDAC8-205ENST00000373568 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
HDAC8-205ENST00000373568 TCP10Q12799 353 aa15.99■□□□□ 0.15
HDAC8-205ENST00000373568 CYP4F22Q6NT55 531 aa15.99■□□□□ 0.15
HDAC8-205ENST00000373568 CHD1LQ86WJ1 897 aa15.99■□□□□ 0.15
HDAC8-205ENST00000373568 RIOK1Q9BRS2 568 aaKnown RBP15.99■□□□□ 0.15
HDAC8-205ENST00000373568 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
HDAC8-205ENST00000373568 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
HDAC8-205ENST00000373568 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-205ENST00000373568 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 USP2O75604 605 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-205ENST00000373568 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
HDAC8-205ENST00000373568 ADD2P35612 726 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 PDE1AP54750 535 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 PRKG1Q13976 671 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 SLC9C2Q5TAH2 1124 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 RGMBQ6NW40 437 aa15.98■□□□□ 0.15
HDAC8-205ENST00000373568 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms