RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 TRPM4Q8TD43 1214 aa11.62□□□□□ -0.55
ITM2A-201ENST00000373298 ABCF2Q9UG63 623 aa11.62□□□□□ -0.55
ITM2A-201ENST00000373298 CNOT7Q9UIV1 285 aaKnown RBP11.62□□□□□ -0.55
ITM2A-201ENST00000373298 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
ITM2A-201ENST00000373298 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
ITM2A-201ENST00000373298 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
ITM2A-201ENST00000373298 DOCK2Q92608 1830 aa11.62□□□□□ -0.55
ITM2A-201ENST00000373298 MYH2Q9UKX2 1941 aa11.61□□□□□ -0.55
ITM2A-201ENST00000373298 GOLIM4O00461 696 aa11.61□□□□□ -0.55
ITM2A-201ENST00000373298 SEMA3EO15041 775 aa11.61□□□□□ -0.55
ITM2A-201ENST00000373298 TBC1D10BQ4KMP7 808 aaPredicted RBP11.61□□□□□ -0.55
ITM2A-201ENST00000373298 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
ITM2A-201ENST00000373298 TTF2Q9UNY4 1162 aaKnown RBP11.61□□□□□ -0.55
ITM2A-201ENST00000373298 SCN4AP35499 1836 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
ITM2A-201ENST00000373298 ADGRA1Q86SQ6 560 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 HAUS7Q99871 368 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
ITM2A-201ENST00000373298 SALL1Q9NSC2 1324 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 DLK2Q6UY11 383 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 TAF1DQ9H5J8 278 aaPredicted RBP11.6□□□□□ -0.55
ITM2A-201ENST00000373298 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
ITM2A-201ENST00000373298 TTC41PQ6P2S7 1318 aa11.59□□□□□ -0.55
ITM2A-201ENST00000373298 GSPT1P15170 499 aaKnown RBP11.59□□□□□ -0.55
ITM2A-201ENST00000373298 ZNF280AP59817 542 aaPredicted RBP11.59□□□□□ -0.55
ITM2A-201ENST00000373298 MECOMQ03112 1051 aa11.59□□□□□ -0.55
ITM2A-201ENST00000373298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
ITM2A-201ENST00000373298 DPF2Q92785 391 aa11.59□□□□□ -0.55
ITM2A-201ENST00000373298 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
ITM2A-201ENST00000373298 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
ITM2A-201ENST00000373298 MYH7P12883 1935 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 KIF3CO14782 793 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 EPHX2P34913 555 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 RGS3P49796 1198 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 PRMT6Q96LA8 375 aaPredicted RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 GPBP1L1Q9HC44 474 aaPredicted RBP11.58□□□□□ -0.56
ITM2A-201ENST00000373298 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
ITM2A-201ENST00000373298 MYO3BQ8WXR4 1341 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 CRKP46108 304 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 CFAP100Q494V2 611 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 ZBED3Q96IU2 234 aaPredicted RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 WNT10BO00744 389 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 CACNB3P54284 484 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 KIF4BQ2VIQ3 1234 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 APOBEC3HQ6NTF7 200 aaKnown RBP11.57□□□□□ -0.56
ITM2A-201ENST00000373298 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 DAGLAQ9Y4D2 1042 aa11.57□□□□□ -0.56
ITM2A-201ENST00000373298 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
ITM2A-201ENST00000373298 AK9Q5TCS8 1911 aa11.56□□□□□ -0.56
ITM2A-201ENST00000373298 H7C1D1 291 aa11.56□□□□□ -0.56
ITM2A-201ENST00000373298 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
ITM2A-201ENST00000373298 FMR1Q06787 632 aaKnown RBP eCLIP11.56□□□□□ -0.56
ITM2A-201ENST00000373298 MAGEB6Q8N7X4 407 aa11.56□□□□□ -0.56
ITM2A-201ENST00000373298 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
ITM2A-201ENST00000373298 CDK5RAP2Q96SN8 1893 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 TCRBV5S4A2TA0A5A2 114 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 ERC2O15083 957 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 PDE6AP16499 860 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.56
ITM2A-201ENST00000373298 TTC22Q5TAA0 569 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
ITM2A-201ENST00000373298 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
ITM2A-201ENST00000373298 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
ITM2A-201ENST00000373298 ECM29Q5VYK3 1845 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 ZNF532Q9HCE3 1301 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 IQCA1LA6NCM1 817 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 DYNLL1P63167 89 aaKnown RBP11.54□□□□□ -0.56
ITM2A-201ENST00000373298 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 KBTBD3Q8NAB2 608 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 TEKT1Q969V4 418 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
ITM2A-201ENST00000373298 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 MROH7-TTC4A0A0A0MT08 1334 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 GAKO14976 1311 aa11.54□□□□□ -0.56
ITM2A-201ENST00000373298 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
ITM2A-201ENST00000373298 SDSP20132 328 aa11.53□□□□□ -0.56
ITM2A-201ENST00000373298 CYP7A1P22680 504 aa11.53□□□□□ -0.56
ITM2A-201ENST00000373298 NFIAQ12857 509 aa11.53□□□□□ -0.56
ITM2A-201ENST00000373298 DLGAP5Q15398 846 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms