RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
HDLBP-202ENST00000373292 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-202ENST00000373292 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
HDLBP-202ENST00000373292 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
HDLBP-202ENST00000373292 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
HDLBP-202ENST00000373292 NAPBQ9H115 298 aa13.16□□□□□ -0.3
HDLBP-202ENST00000373292 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
HDLBP-202ENST00000373292 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 MINDY4BA8MYZ0 360 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
HDLBP-202ENST00000373292 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-202ENST00000373292 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 PFKFB2O60825 505 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 F13A1P00488 732 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
HDLBP-202ENST00000373292 LARP1BQ659C4 914 aaKnown RBP13.15□□□□□ -0.3
HDLBP-202ENST00000373292 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
HDLBP-202ENST00000373292 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
HDLBP-202ENST00000373292 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 CDC27P30260 824 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
HDLBP-202ENST00000373292 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.311e-8■□□□□ 8.7
HDLBP-202ENST00000373292 LRRC37AA6NMS7 1700 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
HDLBP-202ENST00000373292 TDO2P48775 406 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
HDLBP-202ENST00000373292 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
HDLBP-202ENST00000373292 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
HDLBP-202ENST00000373292 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
HDLBP-202ENST00000373292 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-202ENST00000373292 NMT2O60551 498 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 MCM5P33992 734 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 ALX1Q15699 326 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
HDLBP-202ENST00000373292 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-202ENST00000373292 TMEM63CQ9P1W3 806 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
HDLBP-202ENST00000373292 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
HDLBP-202ENST00000373292 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 USP17L21D6R901 530 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 EVCP57679 992 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 PPARAQ07869 468 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 PCNTO95613 3336 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 SH2B2O14492 632 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 CERS5Q8N5B7 392 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 FIBPO43427 364 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 RALYLQ86SE5 291 aaKnown RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.311e-9■■□□□ 13.5
HDLBP-202ENST00000373292 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-202ENST00000373292 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
HDLBP-202ENST00000373292 BBOX1O75936 387 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-202ENST00000373292 PHKBQ93100 1093 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
HDLBP-202ENST00000373292 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-202ENST00000373292 ZNF274Q96GC6 653 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-202ENST00000373292 GTF2IP78347 998 aa13.1□□□□□ -0.31
HDLBP-202ENST00000373292 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
HDLBP-202ENST00000373292 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
HDLBP-202ENST00000373292 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
HDLBP-202ENST00000373292 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
HDLBP-202ENST00000373292 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
HDLBP-202ENST00000373292 SEMA3EO15041 775 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms