RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 IFT88Q13099 833 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 PDIA5Q14554 519 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 MIS18BP1Q6P0N0 1132 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 MAB21L3Q8N8X9 362 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 XAGE2Q96GT9 111 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
TRERF1-203ENST00000372917 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 A0A1B0GVG6 124 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 EIF3HO15372 352 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRERF1-203ENST00000372917 UPP2O95045 317 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 SYF2O95926 243 aaKnown RBP12.07□□□□□ -0.48
TRERF1-203ENST00000372917 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 CEP57L1Q8IYX8 460 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 PCDHGC5Q9Y5F6 944 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
TRERF1-203ENST00000372917 MYO1BO43795 1136 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 CA8P35219 290 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 COG3Q96JB2 828 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 RASSF9O75901 435 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 PSME1Q06323 249 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 KIF4BQ2VIQ3 1234 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 FAM114A1Q8IWE2 563 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
TRERF1-203ENST00000372917 PHC3Q8NDX5 983 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 RGS12O14924 1447 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 GGCXP38435 758 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 USP5P45974 858 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 STIM1Q13586 685 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 HOOK2Q96ED9 719 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
TRERF1-203ENST00000372917 LGR5O75473 907 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 FESP07332 822 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 TMEM62Q0P6H9 643 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 TAX1BP1Q86VP1 789 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 RBM17Q96I25 401 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 VWA3AA6NCI4 1184 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 PDILTQ8N807 584 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 MPP3Q13368 585 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 RASA3Q14644 834 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 ANO10Q9NW15 660 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 MYO1AQ9UBC5 1043 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 ABCA6Q8N139 1617 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 TET3O43151 1660 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 M0R2C6 588 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 SASH1O94885 1247 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 DYDC1Q8WWB3 177 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 STAMBPL1Q96FJ0 436 aa12.05□□□□□ -0.48
TRERF1-203ENST00000372917 DNAAF2Q9NVR5 837 aaKnown RBP12.05□□□□□ -0.48
TRERF1-203ENST00000372917 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 CUTAO60888 179 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 RNF8O76064 485 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 HSPA4P34932 840 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 PDCLQ13371 301 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 NFE2L2Q16236 605 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 RPAP2Q8IXW5 612 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-203ENST00000372917 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
TRERF1-203ENST00000372917 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 CUL3Q13618 768 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 DHX40Q8IX18 779 aaKnown RBP12.04□□□□□ -0.48
TRERF1-203ENST00000372917 ERICH2A1L162 156 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 VAMP4O75379 141 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 RASSF8Q8NHQ8 419 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 GORASP1Q9BQQ3 440 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 DCTPP1Q9H773 170 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 RAB21Q9UL25 225 aa12.04□□□□□ -0.48
TRERF1-203ENST00000372917 SHOX2O60902 331 aaPredicted RBP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 FERP16591 822 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 POLD4Q9HCU8 107 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 LIMCH1Q9UPQ0 1083 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 KCNJ6P48051 423 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 AK2P54819 239 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 MIPOL1Q8TD10 442 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
TRERF1-203ENST00000372917 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRERF1-203ENST00000372917 MSH6P52701 1360 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms