RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 TMEM39BQ9GZU3 492 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 PSME4Q14997 1843 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
TMEM254-201ENST00000372273 BTDP43251 543 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 HHIPL2Q6UWX4 724 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 HAUS7Q99871 368 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
TMEM254-201ENST00000372273 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM254-201ENST00000372273 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
TMEM254-201ENST00000372273 MYO1BO43795 1136 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 PDE1AP54750 535 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 RASA3Q14644 834 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 SLC4A8Q2Y0W8 1093 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 ZGPATQ8N5A5 531 aaKnown RBP11.57□□□□□ -0.56
TMEM254-201ENST00000372273 USP40Q9NVE5 1235 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 SUGT1Q9Y2Z0 365 aa11.57□□□□□ -0.56
TMEM254-201ENST00000372273 HSPA6P17066 643 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 DYNLL1P63167 89 aaKnown RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 PICALMQ13492 652 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 SPTY2D1Q68D10 685 aaPredicted RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 CDCA5Q96FF9 252 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 DDX4Q9NQI0 724 aaKnown RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 POLR2AP24928 1970 aaKnown RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 AKAP11Q9UKA4 1901 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 CYP7A1P22680 504 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 APLP1P51693 650 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 GRM1Q13255 1194 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 NBPF12Q5TAG4 269 aaPredicted RBP11.56□□□□□ -0.56
TMEM254-201ENST00000372273 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
TMEM254-201ENST00000372273 MROH7-TTC4A0A0A0MT08 1334 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 MAST3O60307 1309 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 RHBDL3P58872 404 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
TMEM254-201ENST00000372273 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
TMEM254-201ENST00000372273 GAKO14976 1311 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 WDHD1O75717 1129 aaPredicted RBP11.55□□□□□ -0.56
TMEM254-201ENST00000372273 PDE6AP16499 860 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 MRIQ9BWK5 157 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 FAM198AQ9UFP1 575 aa11.55□□□□□ -0.56
TMEM254-201ENST00000372273 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
TMEM254-201ENST00000372273 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 BRCA2P51587 3418 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
TMEM254-201ENST00000372273 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
TMEM254-201ENST00000372273 GPATCH3Q96I76 525 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 TEPSINQ96N21 525 aa11.54□□□□□ -0.56
TMEM254-201ENST00000372273 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
TMEM254-201ENST00000372273 TCRBV5S4A2TA0A5A2 114 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 ZBTB22O15209 634 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 EVX2Q03828 476 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 TTC41PQ6P2S7 1318 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 MYH13Q9UKX3 1938 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 MYO5AQ9Y4I1 1855 aaKnown RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 GLRX3O76003 335 aaKnown RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 TTF1Q15361 905 aaPredicted RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 TGFBRAP1Q8WUH2 860 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 SEC62Q99442 399 aaKnown RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
TMEM254-201ENST00000372273 STAP2Q9UGK3 403 aa11.53□□□□□ -0.56
TMEM254-201ENST00000372273 PITPNM2Q9BZ72 1349 aa11.52□□□□□ -0.56
TMEM254-201ENST00000372273 DDTLA6NHG4 134 aaPredicted RBP11.52□□□□□ -0.57
TMEM254-201ENST00000372273 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 UBE2Q2LH0YL09 131 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 MMP14P50281 582 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
TMEM254-201ENST00000372273 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 SMIM22K7EJ46 135 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 ERC2O15083 957 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 PRKAB2O43741 272 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 MFAP1P55081 439 aaKnown RBP11.51□□□□□ -0.57
TMEM254-201ENST00000372273 GSTO1P78417 241 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 TTLL12Q14166 644 aaPredicted RBP11.51□□□□□ -0.57
TMEM254-201ENST00000372273 ZSCAN29Q8IWY8 852 aaPredicted RBP11.51□□□□□ -0.57
TMEM254-201ENST00000372273 LCORLQ8N3X6 602 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 SDR42E1Q8WUS8 393 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 RIOK1Q9BRS2 568 aaKnown RBP11.51□□□□□ -0.57
TMEM254-201ENST00000372273 ARMT1Q9H993 441 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 ADD2P35612 726 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 HUNKP57058 714 aa11.51□□□□□ -0.57
TMEM254-201ENST00000372273 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
TMEM254-201ENST00000372273 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms