RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 POLR3DP05423 398 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-204ENST00000372064 CLEC4GQ6UXB4 293 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 CDC5LQ99459 802 aaKnown RBP23.98■■□□□ 1.43
VEGFA-204ENST00000372064 PNPLA7Q6ZV29 1317 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 MYSM1Q5VVJ2 828 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 TACC3Q9Y6A5 838 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 CHD4Q14839 1912 aa23.98■■□□□ 1.43
VEGFA-204ENST00000372064 CDKL5O76039 1030 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 KIF23Q02241 960 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 LCORLQ8N3X6 602 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 FSIP1Q8NA03 581 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 KCNG4Q8TDN1 519 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 LY9Q9HBG7 655 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 R3HCC1Q9Y3T6 440 aaKnown RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 KINO60870 393 aaKnown RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 MRPS27Q92552 414 aaKnown RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 CLIC4Q9Y696 253 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 WTIPA6NIX2 430 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 GOLGA6L6A8MZA4 724 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 KIF28PB7ZC32 967 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 BICDL1Q6ZP65 573 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 PTF1AQ7RTS3 328 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 PLA2G4DQ86XP0 818 aa23.97■■□□□ 1.43
VEGFA-204ENST00000372064 FMR1NBQ8N0W7 255 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-204ENST00000372064 GNAT2P19087 354 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 LRP2BPQ9P2M1 347 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 A0A1B0GUL6 1792 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 CDC27P30260 824 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 LIFRP42702 1097 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 STX1AQ16623 288 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 MIGA1Q8NAN2 632 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 AIFM3Q96NN9 605 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 KCNF1Q9H3M0 494 aa23.96■■□□□ 1.43
VEGFA-204ENST00000372064 ECM29Q5VYK3 1845 aa23.95■■□□□ 1.43
VEGFA-204ENST00000372064 IQCB1Q15051 598 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 CCDC144CPQ8IYA2 1237 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 CNNM2Q9H8M5 875 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 SPTLC3Q9NUV7 552 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 ANKRD18AQ8IVF6 992 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 ZSWIM5Q9P217 1185 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 SLC4A4Q9Y6R1 1079 aa23.95■■□□□ 1.42
VEGFA-204ENST00000372064 NID2Q14112 1375 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 NOLC1Q14978 699 aaKnown RBP eCLIP23.94■■□□□ 1.425e-26■□□□□ 10.1
VEGFA-204ENST00000372064 NTRK3Q16288 839 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 TMEM67Q5HYA8 995 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 ZBTB43O43298 467 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 GYG1P46976 350 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 STK38Q15208 465 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 NFXL1Q6ZNB6 911 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.94■■□□□ 1.42
VEGFA-204ENST00000372064 C8orf37Q96NL8 207 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 MYL10Q9BUA6 226 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 ZNF804BA4D1E1 1349 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 ZNF75DP51815 510 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 SF3B3Q15393 1217 aaKnown RBP23.94■■□□□ 1.42
VEGFA-204ENST00000372064 AKNAD1Q5T1N1 836 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 ALG1Q9BT22 464 aa23.94■■□□□ 1.42
VEGFA-204ENST00000372064 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
VEGFA-204ENST00000372064 TOM1O60784 492 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 TDO2P48775 406 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 CPLX2Q6PUV4 134 aaKnown RBP23.93■■□□□ 1.42
VEGFA-204ENST00000372064 C11orf57Q6ZUT1 292 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-204ENST00000372064 SPC24Q8NBT2 197 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 STAG1Q8WVM7 1258 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 PHKBQ93100 1093 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 KRT23Q9C075 422 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 SPTLC2O15270 562 aa23.93■■□□□ 1.42
VEGFA-204ENST00000372064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-204ENST00000372064 NGLY1Q96IV0 654 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 ABCF2Q9UG63 623 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 TAOK2Q9UL54 1235 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 CASZ1Q86V15 1759 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 IFIT3O14879 490 aaKnown RBP23.92■■□□□ 1.42
VEGFA-204ENST00000372064 ANO1Q5XXA6 986 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 TBC1D9BQ66K14 1250 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
VEGFA-204ENST00000372064 SYNE3Q6ZMZ3 975 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 ADGRA1Q86SQ6 560 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 BCL2L12Q9HB09 334 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 STK36Q9NRP7 1315 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 GOLGA8AA7E2F4 631 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 CYP7A1P22680 504 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 NDUFA8P51970 172 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 SF3A1Q15459 793 aaKnown RBP23.91■■□□□ 1.42
VEGFA-204ENST00000372064 RRP12Q5JTH9 1297 aaKnown RBP23.91■■□□□ 1.42
VEGFA-204ENST00000372064 SARM1Q6SZW1 724 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 MFSD6Q6ZSS7 791 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 STK11IPQ8N1F8 1099 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 KIAA1524Q8TCG1 905 aa23.91■■□□□ 1.42
VEGFA-204ENST00000372064 RGL2O15211 777 aa23.9■■□□□ 1.42
VEGFA-204ENST00000372064 RANBP6O60518 1105 aaKnown RBP23.9■■□□□ 1.42
VEGFA-204ENST00000372064 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
VEGFA-204ENST00000372064 BSDC1Q9NW68 430 aaPredicted RBP23.9■■□□□ 1.42
VEGFA-204ENST00000372064 TAF1P21675 1872 aa23.9■■□□□ 1.42
VEGFA-204ENST00000372064 A0A1B0GVL5 298 aa23.9■■□□□ 1.42
VEGFA-204ENST00000372064 VPS72Q15906 364 aa23.9■■□□□ 1.42
VEGFA-204ENST00000372064 KRT40Q6A162 431 aa23.9■■□□□ 1.42
VEGFA-204ENST00000372064 CELF1Q92879 486 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms