RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 HHIPL2Q6UWX4 724 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 VPS37DQ86XT2 251 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 TEKT1Q969V4 418 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 PTPN18Q99952 460 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 IFIT1P09914 478 aaKnown RBP18.75■□□□□ 0.59
SS18L1-202ENST00000370848 SLC5A1P13866 664 aa18.75■□□□□ 0.59
SS18L1-202ENST00000370848 ADORA1P30542 326 aa18.75■□□□□ 0.59
SS18L1-202ENST00000370848 APOBEC3HQ6NTF7 200 aaKnown RBP18.75■□□□□ 0.59
SS18L1-202ENST00000370848 LPIN2Q92539 896 aa18.75■□□□□ 0.59
SS18L1-202ENST00000370848 TMEM39BQ9GZU3 492 aa18.75■□□□□ 0.59
SS18L1-202ENST00000370848 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
SS18L1-202ENST00000370848 MKI67P46013 3256 aaKnown RBP18.75■□□□□ 0.59
SS18L1-202ENST00000370848 VGLL4Q14135 290 aa18.74■□□□□ 0.59
SS18L1-202ENST00000370848 OTUD7BQ6GQQ9 843 aa18.74■□□□□ 0.59
SS18L1-202ENST00000370848 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
SS18L1-202ENST00000370848 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
SS18L1-202ENST00000370848 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 TCP10L2B9ZVM9 353 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 MAP3K9P80192 1104 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 CHAF1AQ13111 956 aaPredicted RBP18.73■□□□□ 0.59
SS18L1-202ENST00000370848 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
SS18L1-202ENST00000370848 CRHR2Q13324 411 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 OTOP1Q7RTM1 612 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 WDR66Q8TBY9 1149 aa18.73■□□□□ 0.59
SS18L1-202ENST00000370848 ZCCHC17Q9NP64 241 aaKnown RBP18.73■□□□□ 0.59
SS18L1-202ENST00000370848 SURF6O75683 361 aaKnown RBP18.72■□□□□ 0.59
SS18L1-202ENST00000370848 TIMM10P62072 90 aa18.72■□□□□ 0.59
SS18L1-202ENST00000370848 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
SS18L1-202ENST00000370848 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
SS18L1-202ENST00000370848 ERO1AQ96HE7 468 aa18.72■□□□□ 0.59
SS18L1-202ENST00000370848 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
SS18L1-202ENST00000370848 PHKA1P46020 1223 aa18.71■□□□□ 0.59
SS18L1-202ENST00000370848 GTF2A2P52657 109 aa18.71■□□□□ 0.59
SS18L1-202ENST00000370848 BRI3BPQ8WY22 251 aa18.71■□□□□ 0.59
SS18L1-202ENST00000370848 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
SS18L1-202ENST00000370848 A0A1B0GUL7 405 aa18.7■□□□□ 0.58
SS18L1-202ENST00000370848 SEMA3EO15041 775 aa18.7■□□□□ 0.58
SS18L1-202ENST00000370848 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
SS18L1-202ENST00000370848 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
SS18L1-202ENST00000370848 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
SS18L1-202ENST00000370848 ERO1BQ86YB8 467 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
SS18L1-202ENST00000370848 TRIM17Q9Y577 477 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 CSADQ9Y600 493 aa18.69■□□□□ 0.58
SS18L1-202ENST00000370848 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 CACNB3P54284 484 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 CAP1Q01518 475 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 SP3Q02447 781 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 PRPF38BQ5VTL8 546 aaKnown RBP18.68■□□□□ 0.58
SS18L1-202ENST00000370848 XAGE2Q96GT9 111 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 ZNF112Q9UJU3 913 aa18.68■□□□□ 0.58
SS18L1-202ENST00000370848 CCL15-CCL14A0A0B4J2E2 113 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 CCL15Q16663 113 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 CCDC102BQ68D86 513 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 FAM151AQ8WW52 585 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 NEUROD6Q96NK8 337 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 AKAP2Q9Y2D5 859 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 DAGLAQ9Y4D2 1042 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
SS18L1-202ENST00000370848 PRDX5P30044 214 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 PPIL2Q13356 520 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 TNNI3KQ59H18 835 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 DCAF15Q66K64 600 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
SS18L1-202ENST00000370848 FAM43AQ8N2R8 423 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 CD99L2Q8TCZ2 262 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 WRNIP1Q96S55 665 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 FPGT-TNNI3KV9GXZ4 949 aa18.66■□□□□ 0.58
SS18L1-202ENST00000370848 DOCK2Q92608 1830 aa18.65■□□□□ 0.58
SS18L1-202ENST00000370848 CETPP11597 493 aa18.65■□□□□ 0.58
SS18L1-202ENST00000370848 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
SS18L1-202ENST00000370848 CHMP4BQ9H444 224 aaKnown RBP18.65■□□□□ 0.58
SS18L1-202ENST00000370848 EFCC1Q9HA90 598 aa18.65■□□□□ 0.58
SS18L1-202ENST00000370848 GAKO14976 1311 aa18.65■□□□□ 0.58
SS18L1-202ENST00000370848 APBB1O00213 710 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 IRF6O14896 467 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 PPATQ06203 517 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 RASGRF1Q13972 1273 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 TAF1CQ15572 869 aaPredicted RBP18.64■□□□□ 0.57
SS18L1-202ENST00000370848 NOL9Q5SY16 702 aaKnown RBP18.64■□□□□ 0.57
SS18L1-202ENST00000370848 CDC42EP5Q6NZY7 148 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 DBNDD2Q9BQY9 259 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 ZFYVE28Q9HCC9 887 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 GNL3LQ9NVN8 582 aaKnown RBP18.64■□□□□ 0.57
SS18L1-202ENST00000370848 TLR7Q9NYK1 1049 aaKnown RBP18.64■□□□□ 0.57
SS18L1-202ENST00000370848 DENND2AQ9ULE3 1009 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
SS18L1-202ENST00000370848 TLR2O60603 784 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 SNAPC2Q13487 334 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 DIXDC1Q155Q3 683 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
SS18L1-202ENST00000370848 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms