RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 SCARF1Q14162 830 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 CST9Q5W186 159 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
GTF2B-201ENST00000370500 DZIP1LQ8IYY4 767 aaKnown RBP11.73□□□□□ -0.53
GTF2B-201ENST00000370500 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 LPIN2Q92539 896 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 ABT1Q9ULW3 272 aaKnown RBP11.73□□□□□ -0.53
GTF2B-201ENST00000370500 PSME4Q14997 1843 aa11.73□□□□□ -0.53
GTF2B-201ENST00000370500 TRAF5O00463 557 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
GTF2B-201ENST00000370500 SLC5A1P13866 664 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 FGFR2P21802 821 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 ECE1P42892 770 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 MTMR14Q8NCE2 650 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 TBC1D22AQ8WUA7 517 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 CLUAP1Q96AJ1 413 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
GTF2B-201ENST00000370500 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
GTF2B-201ENST00000370500 WNT10BO00744 389 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 SRGAP3O43295 1099 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 GYG1P46976 350 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 KIAA0825Q8IV33 1275 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 DDX12PQ92771 950 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
GTF2B-201ENST00000370500 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
GTF2B-201ENST00000370500 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.53
GTF2B-201ENST00000370500 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
GTF2B-201ENST00000370500 FKBP1BP68106 108 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
GTF2B-201ENST00000370500 SAPCD2Q86UD0 394 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 ZBED3Q96IU2 234 aaPredicted RBP11.7□□□□□ -0.54
GTF2B-201ENST00000370500 MRIQ9BWK5 157 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 SUGT1Q9Y2Z0 365 aa11.7□□□□□ -0.54
GTF2B-201ENST00000370500 ZBTB7BO15156 539 aaPredicted RBP11.69□□□□□ -0.54
GTF2B-201ENST00000370500 MYO1BO43795 1136 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 VEGFBP49765 207 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 HDLBPQ00341 1268 aaKnown RBP11.69□□□□□ -0.54
GTF2B-201ENST00000370500 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 MFSD14BQ5SR56 506 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 APOBEC3FQ8IUX4 373 aaKnown RBP11.69□□□□□ -0.54
GTF2B-201ENST00000370500 CERS5Q8N5B7 392 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 C2orf69Q8N8R5 385 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 SIL1Q9H173 461 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 CHMP4BQ9H444 224 aaKnown RBP11.69□□□□□ -0.54
GTF2B-201ENST00000370500 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
GTF2B-201ENST00000370500 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
GTF2B-201ENST00000370500 SEMA3EO15041 775 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
GTF2B-201ENST00000370500 ATP2B3Q16720 1220 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 TNNQ9UQP3 1299 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 A0A1B0GUL6 1792 aa11.68□□□□□ -0.54
GTF2B-201ENST00000370500 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
GTF2B-201ENST00000370500 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 MAP2K2P36507 400 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 ATP8B2P98198 1209 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 MAP2K1Q02750 393 aaPredicted RBP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 NBR1Q14596 966 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 ZNF408Q9H9D4 720 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 GBA2Q9HCG7 927 aaPredicted RBP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 MAP3K7O43318 606 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 NF2P35240 595 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 SSH3Q8TE77 659 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 CAPNS2Q96L46 248 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
GTF2B-201ENST00000370500 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
GTF2B-201ENST00000370500 MAST3O60307 1309 aa11.66□□□□□ -0.54
GTF2B-201ENST00000370500 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
GTF2B-201ENST00000370500 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
GTF2B-201ENST00000370500 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
GTF2B-201ENST00000370500 RLBP1P12271 317 aa11.66□□□□□ -0.54
GTF2B-201ENST00000370500 HUNKP57058 714 aa11.66□□□□□ -0.54
GTF2B-201ENST00000370500 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
GTF2B-201ENST00000370500 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
GTF2B-201ENST00000370500 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
GTF2B-201ENST00000370500 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
GTF2B-201ENST00000370500 COL1A1P02452 1464 aaPredicted RBP11.65□□□□□ -0.54
GTF2B-201ENST00000370500 ZNF646O15015 1829 aaPredicted RBP11.65□□□□□ -0.54
GTF2B-201ENST00000370500 PNMA6EA0A0J9YXQ4 647 aa11.65□□□□□ -0.55
GTF2B-201ENST00000370500 RBM5P52756 815 aaKnown RBP eCLIP11.65□□□□□ -0.55
GTF2B-201ENST00000370500 CHAF1AQ13111 956 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms