RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 APPBP2Q92624 585 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
UBE3D-203ENST00000369747 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
UBE3D-203ENST00000369747 DZIP1Q86YF9 867 aaKnown RBP20.57■□□□□ 0.88
UBE3D-203ENST00000369747 HELLSQ9NRZ9 838 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 CYP46A1Q9Y6A2 500 aa20.57■□□□□ 0.88
UBE3D-203ENST00000369747 F8W031 263 aaPredicted RBP20.56■□□□□ 0.88
UBE3D-203ENST00000369747 GOLGA6L22H0YM25 854 aa20.56■□□□□ 0.88
UBE3D-203ENST00000369747 CYP7A1P22680 504 aa20.56■□□□□ 0.88
UBE3D-203ENST00000369747 GPR162Q16538 588 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
UBE3D-203ENST00000369747 MIGA1Q8NAN2 632 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 PDRG1Q9NUG6 133 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 PSMD14O00487 310 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 BRD1O95696 1058 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 LARP6Q9BRS8 491 aaKnown RBP20.55■□□□□ 0.88
UBE3D-203ENST00000369747 TAF6LQ9Y6J9 622 aa20.55■□□□□ 0.88
UBE3D-203ENST00000369747 SBF1O95248 1867 aa20.54■□□□□ 0.88
UBE3D-203ENST00000369747 PSME4Q14997 1843 aa20.54■□□□□ 0.88
UBE3D-203ENST00000369747 LMNB1P20700 586 aa20.54■□□□□ 0.88
UBE3D-203ENST00000369747 CXCL9Q07325 125 aa20.54■□□□□ 0.88
UBE3D-203ENST00000369747 MAST2Q6P0Q8 1798 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
UBE3D-203ENST00000369747 TSGA10IPQ3SY00 556 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 MCTP1Q6DN14 999 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 KIAA0825Q8IV33 1275 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 TTF2Q9UNY4 1162 aaKnown RBP20.53■□□□□ 0.88
UBE3D-203ENST00000369747 GPAA1O43292 621 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 LARGE1O95461 756 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 PSMA5P28066 241 aa20.53■□□□□ 0.88
UBE3D-203ENST00000369747 ZBTB12Q9Y330 459 aaPredicted RBP20.53■□□□□ 0.88
UBE3D-203ENST00000369747 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
UBE3D-203ENST00000369747 SUGT1Q9Y2Z0 365 aa20.52■□□□□ 0.88
UBE3D-203ENST00000369747 MYH2Q9UKX2 1941 aa20.52■□□□□ 0.88
UBE3D-203ENST00000369747 MBD4O95243 580 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 SCNN1DP51172 638 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 FKBP1AP62942 108 aaKnown RBP20.51■□□□□ 0.87
UBE3D-203ENST00000369747 AIDAQ96BJ3 306 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 LAMA4Q16363 1823 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 FZD9O00144 591 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 DYNLL1P63167 89 aaKnown RBP20.51■□□□□ 0.87
UBE3D-203ENST00000369747 RSBN1LQ6PCB5 846 aaPredicted RBP20.51■□□□□ 0.87
UBE3D-203ENST00000369747 LCORLQ8N3X6 602 aa20.51■□□□□ 0.87
UBE3D-203ENST00000369747 AATFQ9NY61 560 aaKnown RBP eCLIP20.51■□□□□ 0.87
UBE3D-203ENST00000369747 FOXD4L5Q5VV16 416 aaPredicted RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 FOXD4L4Q8WXT5 416 aaPredicted RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 STRBPQ96SI9 672 aaKnown RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 RIOK1Q9BRS2 568 aaKnown RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
UBE3D-203ENST00000369747 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
UBE3D-203ENST00000369747 FSD2A1L4K1 749 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 FOXP2O15409 715 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 CIAPIN1Q6FI81 312 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 ZSCAN31Q96LW9 406 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-203ENST00000369747 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 MROH7-TTC4A0A0A0MT08 1334 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 MAGEB6P1A0A0J9YX57 407 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 HSPD1P10809 573 aaKnown RBP20.49■□□□□ 0.87
UBE3D-203ENST00000369747 RPS6KB1P23443 525 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 GSTO1P78417 241 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 GMLQ99445 158 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-203ENST00000369747 SH2B1Q9NRF2 756 aaPredicted RBP20.49■□□□□ 0.87
UBE3D-203ENST00000369747 RNF181Q9P0P0 153 aa20.49■□□□□ 0.87
UBE3D-203ENST00000369747 TCHHQ07283 1943 aa20.48■□□□□ 0.87
UBE3D-203ENST00000369747 IGSF3O75054 1194 aa20.48■□□□□ 0.87
UBE3D-203ENST00000369747 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
UBE3D-203ENST00000369747 CHAMP1Q96JM3 812 aa20.48■□□□□ 0.87
UBE3D-203ENST00000369747 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.48■□□□□ 0.87
UBE3D-203ENST00000369747 ZNF541Q9H0D2 1346 aa20.48■□□□□ 0.87
UBE3D-203ENST00000369747 PRKAB2O43741 272 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 ME3Q16798 604 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 DAGLAQ9Y4D2 1042 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 LDHCP07864 332 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 EIF6P56537 245 aaKnown RBP20.47■□□□□ 0.87
UBE3D-203ENST00000369747 KRT32Q14532 448 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
UBE3D-203ENST00000369747 CCDC83Q8IWF9 413 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 FAM163AQ96GL9 167 aaPredicted RBP20.47■□□□□ 0.87
UBE3D-203ENST00000369747 TPCN1Q9ULQ1 816 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 GAKO14976 1311 aa20.47■□□□□ 0.87
UBE3D-203ENST00000369747 CYP21A2P08686 494 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 TNIP1Q15025 636 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
UBE3D-203ENST00000369747 MYO3BQ8WXR4 1341 aa20.46■□□□□ 0.87
UBE3D-203ENST00000369747 GOLGA6L3A6NEY3 463 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 GRIN3BO60391 1043 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 BTDP43251 543 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms