RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CEP89Q96ST8 783 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ADD2P35612 726 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF76P36508 570 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 PDIA6Q15084 440 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 FAM196AQ6ZSG2 479 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ZNF589Q86UQ0 364 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 IFNL3Q8IZI9 196 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 CCAR2Q8N163 923 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 CUL5Q93034 780 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 NCOA5Q9HCD5 579 aaKnown RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ARGLU1Q9NWB6 273 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ARPP21Q9UBL0 812 aaPredicted RBP6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 HDAC9Q9UKV0 1011 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 MTMR6Q9Y217 621 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ZKSCAN5Q9Y2L8 839 aa6.1□□□□□ -1.43
SMNDC1-202ENST00000369603 ATP2B4P23634 1241 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 BCAMP50895 628 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 ANO6Q4KMQ2 910 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 TMC4Q7Z404 712 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 TEX11Q8IYF3 940 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 TXLNBQ8N3L3 684 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 LRRC27Q9C0I9 530 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 KIF20AO95235 890 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 FGFR1OPO95684 399 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 FOXO4P98177 505 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 PPARAQ07869 468 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 GPS2Q13227 327 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 HLFQ16534 295 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 CDC37L1Q7L3B6 337 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 PDCL2Q8N4E4 241 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 KRI1Q8N9T8 703 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 CALML4Q96GE6 196 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 EHMT1Q9H9B1 1298 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 RMND1Q9NWS8 449 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 MED23Q9ULK4 1368 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 NRXN3Q9Y4C0 1643 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 AKAP12Q02952 1782 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 RPAP1Q9BWH6 1393 aaPredicted RBP6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 MYO1BO43795 1136 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 JAK2O60674 1132 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 YEATS4O95619 227 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 GNA11P29992 359 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 ALDH1B1P30837 517 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 NT5C2P49902 561 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 SUSD4Q5VX71 490 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 ANO1Q5XXA6 986 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 OGFOD1Q8N543 542 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 GTPBP4Q9BZE4 634 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 C6orf50Q9HD87 102 aa6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 LUC7LQ9NQ29 371 aaKnown RBP6.09□□□□□ -1.43
SMNDC1-202ENST00000369603 FMN2Q9NZ56 1722 aa6.09□□□□□ -1.44
SMNDC1-202ENST00000369603 ELP1O95163 1332 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 TOP1P11387 765 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 MARCKSP29966 332 aaPredicted RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 GYG1P46976 350 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 CCDC112Q8NEF3 446 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 RRP36Q96EU6 259 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 MEGF6O75095 1541 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ZNF804BA4D1E1 1349 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 BIN1O00499 593 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 SSBP05455 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 RXRAP19793 462 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 TTLL5Q6EMB2 1281 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 GOLGA6L1Q8N7Z2 621 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 LZTS2Q9BRK4 669 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ZKSCAN3Q9BRR0 538 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 CLSTN2Q9H4D0 955 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 BSDC1Q9NW68 430 aaPredicted RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 AATFQ9NY61 560 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ZNF219Q9P2Y4 722 aaPredicted RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 JCADQ9P266 1359 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ZMYM6O95789 1325 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ZSCAN12O43309 604 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 PDIA3P30101 505 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 CTDSPL2Q05D32 466 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 TNIP1Q15025 636 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 HEATR3Q7Z4Q2 680 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 NLGN1Q8N2Q7 840 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 VAT1LQ9HCJ6 419 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 STK32BQ9NY57 414 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 COL15A1P39059 1388 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 XDHP47989 1333 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 SPATA31A1Q5TZJ5 1347 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 F8W031 263 aaPredicted RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 PDE6BP35913 854 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 NAPAP54920 295 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 PKP1Q13835 747 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 SLC4A8Q2Y0W8 1093 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 ERFEQ4G0M1 354 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 KRT40Q6A162 431 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 KLHL10Q6JEL2 608 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 BARGINQ6ZT62 677 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 CCDC150Q8NCX0 1101 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 QTRT2Q9H974 415 aaKnown RBP6.08□□□□□ -1.44
SMNDC1-202ENST00000369603 SEC31BQ9NQW1 1179 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms