RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 TRIM29Q14134 588 aa16.74■□□□□ 0.27
SEMA6C-204ENST00000368914 ME3Q16798 604 aa16.74■□□□□ 0.27
SEMA6C-204ENST00000368914 ZNF609O15014 1411 aa16.74■□□□□ 0.27
SEMA6C-204ENST00000368914 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 TM4SF1P30408 202 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 USP40Q9NVE5 1235 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 C5P01031 1676 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 NECTIN1Q15223 517 aa16.73■□□□□ 0.27
SEMA6C-204ENST00000368914 PATL2C9JE40 543 aaKnown RBP16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 CAMKK2Q96RR4 588 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 GRIK5Q16478 980 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 WTAPQ15007 396 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 UBE3CQ15386 1083 aa16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 ZRSR1Q15695 479 aaKnown RBP16.72■□□□□ 0.27
SEMA6C-204ENST00000368914 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 PHKBQ93100 1093 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 KIF3AQ9Y496 699 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 FGFR2P21802 821 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 GSTO1P78417 241 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 ADGRA1Q86SQ6 560 aa16.71■□□□□ 0.27
SEMA6C-204ENST00000368914 PDE4BQ07343 736 aa16.71■□□□□ 0.26
SEMA6C-204ENST00000368914 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.26
SEMA6C-204ENST00000368914 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.26
SEMA6C-204ENST00000368914 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.26
SEMA6C-204ENST00000368914 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 ESR2Q92731 530 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 PPARAQ07869 468 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 SNX21Q969T3 373 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 DSCC1Q9BVC3 393 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 PIM2Q9P1W9 311 aa16.7■□□□□ 0.26
SEMA6C-204ENST00000368914 LRRC37A3O60309 1634 aa16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 IFIT1BQ5T764 474 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 BICD2Q8TD16 824 aa16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 ZBTB43O43298 467 aa16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 GPR162Q16538 588 aa16.69■□□□□ 0.26
SEMA6C-204ENST00000368914 GLI3P10071 1580 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 SLURP2P0DP57 97 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 MCM4P33991 863 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 TRAK2O60296 914 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 ECE2O60344 883 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 TBC1D10CQ8IV04 446 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 STX6O43752 255 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 NMT2O60551 498 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 TFAP4Q01664 338 aa16.68■□□□□ 0.26
SEMA6C-204ENST00000368914 CACNA1FO60840 1977 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 RAB3GAP1Q15042 981 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 GJB4Q9NTQ9 266 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 GNAT2P19087 354 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 TEKT1Q969V4 418 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 TDRD3Q9H7E2 651 aaKnown RBP16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 EVX2Q03828 476 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 CCDC96Q2M329 555 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 TRIM22Q8IYM9 498 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
SEMA6C-204ENST00000368914 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 NSUN4Q96CB9 384 aaKnown RBP16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 PKD1L3Q7Z443 1732 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 CCDC93Q567U6 631 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 SYT1P21579 422 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
SEMA6C-204ENST00000368914 CATIPQ7Z7H3 387 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 KAT14Q9H8E8 782 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 ITGB4P16144 1822 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms